| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0976 |
|---|
| Symbol | |
|---|
| ID | 4173825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1167439 |
|---|
| End bp | 1167789 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638053977 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660556 |
|---|
| Protein GI | 109897301 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC AAAATCTGAT CACCCAAGTG CGTACCCAAC CACAAAGTGT TGAGTTCAGC
CAAGTGATTA ATACGATACA ACAACACTAC CGATACACAG CAACCGCATT CACCAATGGT
GACGTGGTCA ATGAAAAAGG CAGCAATGAA GGTTCATGCA AGATTTTTTA CTTTGCGCAA
CTCAATCAAT TAACGGAAAC TGAAACATTG CACTTATTTG GTACCTTTTA CCGCAACGAT
GTATTGCAGC ACCCTGACGC CAACGATCAC GGTAATATCA GAAATTTTAT GAATACAGGT
TGGCAGGGAA TTAAATTCGA GTCCGCTGCA CTGTCTCCAT TAACAGCATA A
|
|---|
| Protein sequence | MTIQNLITQV RTQPQSVEFS QVINTIQQHY RYTATAFTNG DVVNEKGSNE GSCKIFYFAQ
LNQLTETETL HLFGTFYRND VLQHPDANDH GNIRNFMNTG WQGIKFESAA LSPLTA
|
|---|
| |