| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0974 |
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| Symbol | |
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| ID | 4173823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1166249 |
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| End bp | 1166896 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053975 |
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| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
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| Protein accession | YP_660554 |
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| Protein GI | 109897299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
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| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAA ATTGGAAAGT TTCGTCTCAA GATGTATTCA GTCAAGGACC AGTGGTTCCT
GTATTGGTGA TCAAAGATGT AAAGCATGCG GTCCCTCTTG CTAAAGCATT AATTGCTGGC
GGTATTCGTG TATTGGAAGT GACATTGCGC ACAGAAGCAG CACTGGACGT AATCAAAGCT
ATCGCGACTG AAGTGCCAGA TGCCATCATA GGTGCAGGTA CGGTAACGAA TGCTAAGCAA
TTAGCTGAAG TTGAAGCGGC GGGTGCTATG TTCGCAATAA GCCCTGGTAT GACATCTGAC
TTATTGGATG CAGGTAATAA AGGCGGTATC GCGCTCATTC CTGGTATCTC TTCTATTTCT
GAATTAATGC GCGGAATTGA CTTCGGTTAT ACCCACTTTA AATTCTTCCC AGCTGAAGCC
TCCGGTGGCG TTAAAGCCAT TAAAGCGATC GGTGGACCAT TCCCTGACAT CGCGTTTTGC
CCAACAGGTG GCATAAGCCC AACTAATTAC CTTGAGTATT TATCATTGCC TAACGTGCGT
TGTGCAGGAG GCTCTTGGTT AGCACCTGAC GATGCTGTTG AAGCGGGTGA TTGGGATCGT
ATTACTGAGC TGGCTAAACA AGCCGTTGCT GGCGCAGCCG GTATTTAA
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| Protein sequence | MTKNWKVSSQ DVFSQGPVVP VLVIKDVKHA VPLAKALIAG GIRVLEVTLR TEAALDVIKA
IATEVPDAII GAGTVTNAKQ LAEVEAAGAM FAISPGMTSD LLDAGNKGGI ALIPGISSIS
ELMRGIDFGY THFKFFPAEA SGGVKAIKAI GGPFPDIAFC PTGGISPTNY LEYLSLPNVR
CAGGSWLAPD DAVEAGDWDR ITELAKQAVA GAAGI
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