| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0964 |
|---|
| Symbol | |
|---|
| ID | 4173141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1152458 |
|---|
| End bp | 1153468 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638053965 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660544 |
|---|
| Protein GI | 109897289 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATC AAACATCTGC GCCGGTTGTC GTGTGCGCTT TATACAAATT CGTGACCCTC
GAAAACTTTG AAGAAATGCG CCAACCCCTG TTAACGTTTA TGCAAGATAA CGGTATTAAA
GGAACGTTGT TGTTAGCGGA AGAGGGGATC AATGGCACCG TTTCTGGTTC TCGCGAGGGT
ATCAATGCGT TATTGAATTA CCTGAATGAA GACCCGCGCA TTGCGCCTAT TTCTCATAAA
GAATCGTTGG ACGAAACCCA GCCTTTTCAT CGCACCAAAG TAAAGTTAAA GAAAGAAATC
GTCACCATGG GCGTGGAAGG CATAGACCCT CTTCGTACTG TGGGTACCTA TGTGAAGCCG
AAAGATTGGA ACGCGTTAAT CTCAGATCCT GATGTCACCG TTATCGATAC TCGCAACGAT
TATGAAATCG AAATCGGTAC CTTCAAAAAT GCCATTAATC CTAATACCGA GTCTTTTCGT
GAGTTTCCGC AATACGTTAA AGACAATTTA GAGCCGTCTA AGAATAAGAA GGTCGCTATG
TTCTGCACGG GTGGTATTCG TTGTGAAAAA TCAACCGCGT ACTTGAAAGA GCAAGGTTTT
GACGAGGTTT ACCACTTAGA AGGCGGCATT CTTAAGTACT TGGAAGAAGT CCCGAAAGAC
GACACCTTAT GGGAAGGGGA TTGTTTTGTC TTCGATAACC GGGTTGCGGT CAATCATGAC
TTACAAAAAA GTGAATACGA CCAGTGTTAT GCCTGTCGTT TGCCCATTAC CGAAGAAGAT
AAGGCAAGCC CACTTTTTGA AGCTGGAGCC AGTTGCCCTA AATGTCATGG TACGCATAGC
GAAGAGCAAC TTAAACGCTT TCGTGAGCGT GAGAAGCAGG TGAACCTTGC GCGCGAACGT
AACGAAGCGC ATGTGGGCGA AGACGCCACT AAGGCCATAA AATTACGCCG CCAGCAAAAA
GCTGCACAAA GGCGAGCTCA ACGCACCGCT GCTGGAAAAA GCAACGGTTA G
|
|---|
| Protein sequence | MQNQTSAPVV VCALYKFVTL ENFEEMRQPL LTFMQDNGIK GTLLLAEEGI NGTVSGSREG
INALLNYLNE DPRIAPISHK ESLDETQPFH RTKVKLKKEI VTMGVEGIDP LRTVGTYVKP
KDWNALISDP DVTVIDTRND YEIEIGTFKN AINPNTESFR EFPQYVKDNL EPSKNKKVAM
FCTGGIRCEK STAYLKEQGF DEVYHLEGGI LKYLEEVPKD DTLWEGDCFV FDNRVAVNHD
LQKSEYDQCY ACRLPITEED KASPLFEAGA SCPKCHGTHS EEQLKRFRER EKQVNLARER
NEAHVGEDAT KAIKLRRQQK AAQRRAQRTA AGKSNG
|
|---|
| |