Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0961 |
Symbol | |
ID | 4173138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1148224 |
End bp | 1150959 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638053962 |
Product | TPR repeat-containing serine/threonin protein kinase |
Protein accession | YP_660541 |
Protein GI | 109897286 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACACA ATGAATGGCA AACAGTACAA GACATCTTTC ATCACGCAAT TTCTCTGCCC GCAGAGCAAC GCAGCGCGTA CGTTCAGCAG CAATGCAAAA ATGACTCATC CCTCTATCAA GAGATCATAT CCTTATTAGA CCATCATGAG AAAAGCACTG AAATTGACGC CATCGTAGAT TACGCAGCCC ATTGCGTTGT TAACCAGACA CCACAGAAGA TCGGTGATCT GGTAGACCGT TATCGCTTAG TTGAAATGAT TGGACAAGGA GGAATGGGCG ATATCTACCT GGCCGAAAGA GCTGATGAAC ACTACACCCA ACGTGTGGCA ATAAAAATTA ATCGAAATGC ACTTGCCAAT GCTGACCGTG CATTACGCTT TAAAACCGAG CGACAAATCT TAGCCAACTT AGAACACCCA AACATTGCGC GCTTGCTAGA TGGCGGAACC ACGCTTACAA ATCAGCCCTA TCTAGTAATG GAATTCATAG AAGGCACACC TATCGACCAG TACTGCCAAG AAAATAACCT GAGCCTTAAT CAACGCCTTA GACTGTTTCA AAAAGTCTGC GACGCAGTGC AGTATGCTCA TCAGCACTTG GTGGTGCATT GTGACTTAAA GCCATCAAAC ATACTCATTA CCTCACAGGG GGAGCCTAAA TTACTCGATT TCGGTATTTC TAGATTACTC GACCCACAAC AGCCCAGCGA ACAACATCCA GTTGATGCCA ATGCTGATCG CATGCTTAGC CTTCATTATT CAAGCCCAGA GCAAATTTGC GGCGATCCCC TGTCCACCAG CACAGACATT TATTCTCTGG GTGTGCTCCT ATACAAGCTA CTGACCCAAC AGCTCCCCTA CGAGAACGCA CCCGGCAGTT TACATGACGC CATTCTAAAA TTTACGCCAG AACCCCCAAG CAAATTGCTG CTGCATGATA AATCTCCTCT GGGAAGTGCC CGCAATACTC AGCACACCAT GATAAAGGCA AAGGACGTCG CTGGTGATTT AGACGCTATC ACTTTAAAAG CGCTGCACAA CAGAGCATCC TTGCGCTATA AAAACGTTAC TCAGTTTTCT AACGACCTTG ATTGTTACCT GAACCATTTT CCCGTCATGG CGCACCGTAA CACTTGGCTT GTTCGTAGTA GAAAATTTCT GCGGCGCAAT CGACTTTCTA GCGCACTGGC TGCTTTATTC TTGATTACGA TGACCACAAC AAGCAGCGCT ATTTTCATCC AGTCTCAACG CATTGCTCAA GAGCGTGACA CCGCTGAGCA AGAGCGCGGT AAAGCAGTTG CTATCACTGA CTTTTTGCAC AACATGTTTT TTTCTATTCA GCCTGATAAA GCCCAAGGTG AAGTTATCAC AGTAAGGGAA ATATTAGATA AAGCCAGTGA GGAACTTAAT GAGAGTGACG ACCACACACT TTTAGCACAA CCTATGATAC AGGCTGCGGT ACGGCGCACC ATTGGCGATA TATATTATCG ATTGGGCGTT ATTCAACCAG CAATTGAGCA CTTAGAAAAA GCCTTAGCAC TGCACAGAAA GCATCAAGGG GATGACGCAG GATTCTATCG AGTGCTCAGG GCCTTAGCTA ATTCTTATAA TCGCGCTGAT AAATTTGATT TGCAGCGGCC AATTTTGGAA GAATCAATAG ATGTCGCCAA GCGTATTTTT GGTGAAAATG ATGAAAAAAC ATTGGGCGTC ATGTCTAATC TTGCCGGCCT TTACAATGAT ACAGGCAATT CATTTCTGGC AATTAAGCTG CACAATGAAA TCTACGATAA AAGCTTACGC GCTTTAGGCC CGTCCAATAT TGTCACCATA CTTGCCATCA CCAGTCTTGG GGCTGACTAT TATGCGTTGG GTGACTATCA AAAAGCCGAA GAATATTTTA CCCAAGGGTT AGAAGCATGC TTAAAAGAAT GGAACGAGAA CCATGGATTG GCTTTGTATA ATTTGGCTGG TGTTGGGTAT GTACTGGAGC GCTTGGGGCA GTTTGAAGCA GGGTTCATAC CTACAAAAAA ACGCTTAGAG CGCGCGCTAC ATGTACTAGG TGAGCAACAC CAAGACACCC TAGACGCCAA GCTGAGTATG GGCCGTATTC AGCTCGGGTT AGGCGAATTC GCTCAAGCGG AGGCTCTGTT CAATAATATT CTACTGGCTT TAACGCACCG TACCGGTAGC CATCACGCCC TCAACTATTC GACGCGCTTT GCCTTAGCAC AGCTATATAT AAAAACAGAT CGCGCCGCTT TAGCATTACC CTTAGCTCAG CAAACCTTAG TTAAAGCCAA AGCAGTATGG GCAGAAGATA ACTTGAAGGT ACTGTTTGGC ACCCAGATAT TGGCCGATGC GCTCGTCGCT GAGCAGCAAT ACCAAAAAGC TATCACGCAT TATCAACAAA TTTTGAACAG TCGCCAGCGC AGTATCGAAA AGGAGCAAAT GCAAAATAAA CAATTTGAAA TTGATCACCA GCAGGTCAAA TACGTCGAAG CGTATAATGC CCACTTAGGG TTGGCCAAGG CGTATATAAA GCTAGAGCAA AGTGCCGACA GCATCGAACA CTTGCGCGGT GCATTGAGAT TGAATCAAGC CCATCCGTCC ATGGTAGCGA CTGACCTACC ATGGGTGTTG GCCTCCTTAC TTAACGAATA CGAAGACTCA GGAAGCACAA AACAAGCTTC AAACATACGT GCTCAGCTTA TCGCACTAGA CCCGCGCTCT CCCTAA
|
Protein sequence | MKHNEWQTVQ DIFHHAISLP AEQRSAYVQQ QCKNDSSLYQ EIISLLDHHE KSTEIDAIVD YAAHCVVNQT PQKIGDLVDR YRLVEMIGQG GMGDIYLAER ADEHYTQRVA IKINRNALAN ADRALRFKTE RQILANLEHP NIARLLDGGT TLTNQPYLVM EFIEGTPIDQ YCQENNLSLN QRLRLFQKVC DAVQYAHQHL VVHCDLKPSN ILITSQGEPK LLDFGISRLL DPQQPSEQHP VDANADRMLS LHYSSPEQIC GDPLSTSTDI YSLGVLLYKL LTQQLPYENA PGSLHDAILK FTPEPPSKLL LHDKSPLGSA RNTQHTMIKA KDVAGDLDAI TLKALHNRAS LRYKNVTQFS NDLDCYLNHF PVMAHRNTWL VRSRKFLRRN RLSSALAALF LITMTTTSSA IFIQSQRIAQ ERDTAEQERG KAVAITDFLH NMFFSIQPDK AQGEVITVRE ILDKASEELN ESDDHTLLAQ PMIQAAVRRT IGDIYYRLGV IQPAIEHLEK ALALHRKHQG DDAGFYRVLR ALANSYNRAD KFDLQRPILE ESIDVAKRIF GENDEKTLGV MSNLAGLYND TGNSFLAIKL HNEIYDKSLR ALGPSNIVTI LAITSLGADY YALGDYQKAE EYFTQGLEAC LKEWNENHGL ALYNLAGVGY VLERLGQFEA GFIPTKKRLE RALHVLGEQH QDTLDAKLSM GRIQLGLGEF AQAEALFNNI LLALTHRTGS HHALNYSTRF ALAQLYIKTD RAALALPLAQ QTLVKAKAVW AEDNLKVLFG TQILADALVA EQQYQKAITH YQQILNSRQR SIEKEQMQNK QFEIDHQQVK YVEAYNAHLG LAKAYIKLEQ SADSIEHLRG ALRLNQAHPS MVATDLPWVL ASLLNEYEDS GSTKQASNIR AQLIALDPRS P
|
| |