| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0958 |
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| Symbol | |
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| ID | 4173135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1143550 |
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| End bp | 1145889 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053959 |
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| Product | hypothetical protein |
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| Protein accession | YP_660538 |
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| Protein GI | 109897283 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.764454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGA AAATAGCCAG AAAAACCTAT AAAGAACGTT ATTTTACCTT CGTTATCCAT
AACCCAAAAT GGATCCTACT GATCGCCACG CTGCTGATTG TCGCCATGGG AGTTGGGCTT
AAACATGTTC ACAAAGACCC CTCTGTGGAT GCGTTTGTTC CTAACGATCA TCCTGCTGCG
CTTGCCAGAG ATAGAGCAAG TGAACTGTTT GGCATTGAAG ATCCCATCGT ACTGGGCATT
GTGGCTAACG ATAACCAATC TGCCTTTAGC GCCGATATTA TTCAAGCGTT AGGCTTGATC
CAACAGGACG TACGCGGGCT AGATAATGTT AAAAAAAATG CTCTGATCAG TATTTTGACC
GAGAATGCTA TCTATGGGGA TGAGGGGGAT TTGCTCGTAG AGCCAATTCT ACCGACGGGG
GAGGTGACAC ATAACAAAGC GGTGATAGCG TTAGAGAGGT TGCGCAGCAT GCCTATGATG
GACGGCCTGC TTGCATCCAA AAACGGTGAC ACACTGACCT TAATCATACC GGTTCAAGAC
GCCAACCACG CGACGCAAAC CTACCAACAG GTGCTGGCAA TTGGCCAAAC GCACCGGCCT
GAGAATGCAG AGGTGCACGT GACCGGTGTG GCATCAATGA ATGGGCGTTT GGCGCAGATG
GTCAATCAAG ATACGCGCAT ATTCATTCCT ATGGCGATTA TCACTGCACT GTTGGTGATC
TTTATTGCTT TGCGTGAATG GCGTGGATTA CCCGGCCCAT TATTGGTTAT TGCTGGCTCG
GCGGCGATGA CAGTAGGCTT GATGGGGTGG TTGGATGCCA GATATTACTT AATCACCACG
GCGTTGCCTG TGATCATTAT GGCGATATCA ATAGCTGATA GTTTGCATGT ATCTACTATC
TTTATGGAAA AATGCCGTGT TGAGCCAAGT AAAAGCAAGG CCGACTTGCT ATTGGCCACG
CTCAATCAAA CTTTCTTGCC CGTTACTCTG ACGACGGTAA CGACCGTTGC CGGGTTTGTG
GGTCTGGCAA TAGGCTCGTC AATGCAGCCC ATTGCCGAAT TTGGCTGGTT TGCAGCATCC
GGGGTGATCG CCGCGTGGAT CTTGAGTTTA AGCGCCTTGC CTGCGGTTAT GTTATTGATT
GGGCTGGGCA GCAAAAAACA GCCACAATAT GTACAAGACA GCCTAGTGGA TGCGTTGGTT
TATCGCCTAA CGCAAAACGC GTTTAATCAC CCTTGGACAA CCTCTTCCAG CTTAATACTG
GTACTTTGCG TCTTTATTTA TTTTGCTACT CAAGCGCGAT TCGATTATGA GCGCCAACGT
TATTTTCAAG CGGATGAAGA GGTCCGTTTG GCTGACGTGA CCTTAAATAC CCATTTGCAA
GGGCTCAATT TTTTAGATGT GGTGGTGTCA GGTAAACAAG CTGGCGATTT AATGACACCA
GATGCGATGC ATGCCATAGC CATATTGCAG CAACGTATTA ATAAGCTACC ACTCGTGGTT
AAAAGCACCT CCATCAGCGA TTACATGGGG TTAATGCATC GGGCATTGAC TAACGCATCT
GTTGGTGAGT TACCTAGCGC TGAGCATGCG CCGGCACAGT ACATGTTTTT ATATGAGGCG
GCAGGAGACC CAGGTGATTT CAAAGAGGAA ATTGACTTTA CCTATCAGCA TACCCTTATT
CGCGCACAAC TAACGACAGA TCGATTTAGT CAGGTGAGTC CTGTGGTGTC TGAATTTGAG
AGAATTGCTG AAATTTGGTC TCAGGAATAT GATCTAGAGG CCAACGTGAG CGGACGAGTG
GCGGTTAATT CAGGGTGGAT GAAGCTACTC GGAGCTTCTC ATTTTGCCGG ACTCGGTTTG
GCTATTGCCT TTGTTTTTTG TGCTTCGCTT CTCGCCTTTC GCTCATTTTG GGCCGCATTA
TTGAGCCTGG TTCCGATACT TACAGGGGTC CTGTTTACCT ATGCAATGAT GGGGCTTTTA
AAGATAGATA TAGCCCCTGC TACCTCCATG ACGGCGGCCA TTTCAACTGG CTTGGGGGTC
GACTTTGCCA TTCATCTTAT CTCTGGTGTT CGCCAGTCAC TACAAAAAGG CTCGAGCCCT
CGTGCCGCTT TTAGCGGACA TTATGTGGTC ATTGCCAGAG CGTGCGTATT TTCAGCTGTG
GCCTTGGCGT TTGCGTTGGG GGTTATCTGC TTAAGTTCAG CACCGCCATT GCAGTGGTTT
GGTGCACTCG TGGCGTCTGC GTCTATTGGT AGCTTAGCAG GGGCAATTAT TGTTATTCCG
GCGTGTTACG CCCTGTGTGC ACCCACGCCA TTTGTTATCG ATGTAAGAGG GAGTGTGTAA
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| Protein sequence | MTMKIARKTY KERYFTFVIH NPKWILLIAT LLIVAMGVGL KHVHKDPSVD AFVPNDHPAA
LARDRASELF GIEDPIVLGI VANDNQSAFS ADIIQALGLI QQDVRGLDNV KKNALISILT
ENAIYGDEGD LLVEPILPTG EVTHNKAVIA LERLRSMPMM DGLLASKNGD TLTLIIPVQD
ANHATQTYQQ VLAIGQTHRP ENAEVHVTGV ASMNGRLAQM VNQDTRIFIP MAIITALLVI
FIALREWRGL PGPLLVIAGS AAMTVGLMGW LDARYYLITT ALPVIIMAIS IADSLHVSTI
FMEKCRVEPS KSKADLLLAT LNQTFLPVTL TTVTTVAGFV GLAIGSSMQP IAEFGWFAAS
GVIAAWILSL SALPAVMLLI GLGSKKQPQY VQDSLVDALV YRLTQNAFNH PWTTSSSLIL
VLCVFIYFAT QARFDYERQR YFQADEEVRL ADVTLNTHLQ GLNFLDVVVS GKQAGDLMTP
DAMHAIAILQ QRINKLPLVV KSTSISDYMG LMHRALTNAS VGELPSAEHA PAQYMFLYEA
AGDPGDFKEE IDFTYQHTLI RAQLTTDRFS QVSPVVSEFE RIAEIWSQEY DLEANVSGRV
AVNSGWMKLL GASHFAGLGL AIAFVFCASL LAFRSFWAAL LSLVPILTGV LFTYAMMGLL
KIDIAPATSM TAAISTGLGV DFAIHLISGV RQSLQKGSSP RAAFSGHYVV IARACVFSAV
ALAFALGVIC LSSAPPLQWF GALVASASIG SLAGAIIVIP ACYALCAPTP FVIDVRGSV
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