Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0951 |
Symbol | |
ID | 4173128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1136897 |
End bp | 1137817 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638053952 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_660531 |
Protein GI | 109897276 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.012671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTAT CAAATTACAG TATCGCCTTT ATTGGTTTGG GTAATATGGG CGGGCCTATG GCGAGCAATT TACTTAAAGC TCACGCCAAG GTCTGTGTTT TTGACTTAGT ACCCCAAGCG GTTGCGGAAT TAGAAAGCCA AGGTGCACGA GCAGCGCAGA GCGCCGAGGA TGCTGTGAAA GGTGCAGATA TCGTTATTTC CATGCTGCCT GCGGGTAAAC ACGTGCAAAG TTTATATTTA GGAGACAGCG AGCGCGGCAC TGCAGGTTTG ATTGATGTGC TTGGGCAAAA TACGTTAGTG ATTGACTCCA GTACTATTGA CGCAGCAACC TCTATTTTGG TTGCCAAAAC GTTGGCTGAA AGAGGGATCG TGTTTGCTGA TGCGCCTGTG TCCGGTGGAA CAGCGGGCGC TGCTGCGGGC ACGCTCACCT TTATTGTGGG CGGTGAGAAA ACCGCTTATG AAAAGGCTTT ACCTGTACTG AGTGCTATGG GTAAGAACAT TTTTCATGCA GGACAAAATG GCGCAGGGCA AATTGCAAAA ATCTGCAATA ACATGTTGTT GTCTGTATTG ATGGTGGGCA CGTCAGAAGC CTTACAAATG GCCATTGATA ACGGTTTAGA TCCAAAAGTC ATGTCAGATA TTATGCTACA AAGCTCAGGG CGAAACTGGA CACTAGAGCT ATATAACCCA TGTCCAGATG TGATGCCAAA CGTACCGTCA TCAAATGATT ATAAAGGTGG TTTTATGGTG GATTTGATGC GTAAAGATTT AGGCCTAGCG TTGGACACTG CCCTTAAAAG TCATTCCAGC ACGCCCATGG GCGCGATGGC GCAAAACCTG TACAACATGC ACAGCATGCA GGGAAGCGGG CAACGTGATT TCTCAAGTAT TTTCGAGTTA TTTTCAGCGT CAAATAAATA G
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Protein sequence | MSLSNYSIAF IGLGNMGGPM ASNLLKAHAK VCVFDLVPQA VAELESQGAR AAQSAEDAVK GADIVISMLP AGKHVQSLYL GDSERGTAGL IDVLGQNTLV IDSSTIDAAT SILVAKTLAE RGIVFADAPV SGGTAGAAAG TLTFIVGGEK TAYEKALPVL SAMGKNIFHA GQNGAGQIAK ICNNMLLSVL MVGTSEALQM AIDNGLDPKV MSDIMLQSSG RNWTLELYNP CPDVMPNVPS SNDYKGGFMV DLMRKDLGLA LDTALKSHSS TPMGAMAQNL YNMHSMQGSG QRDFSSIFEL FSASNK
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