Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0946 |
Symbol | |
ID | 4173123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1130247 |
End bp | 1131113 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638053947 |
Product | beta-lactamase-like |
Protein accession | YP_660526 |
Protein GI | 109897271 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000101762 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTTC AAGTAAATGG TTTTTATCAT GATGCAACGG GCACAGTCAG TTATATAGTG TCAGACAGTG AACGCAAGCA CGCAGTGATC ATCGACAGCG TTTTAGACTT TGATCTCTTT TCAGGGGAAG TGTCCTCTAC TTTTGCTGAT AAGCAATTGG CATTTCTGCA CGAAAATCAG CTAACGTTGG ACTGGATATT AGACACCCAT GCCCATGCAG ATCACTTAAG TGCTGCCCAT TATTTACACT CAAAAACAGG CGTTAAAACG TGTATAGGGG AAGGGATTAA GGCGGTGGAA GCACGCTTTG CTAAGACGTT CAATTTTCCA CCTGAGGAAG GCCATCGCTT TGACGCGTTC GACAAATTAT TACAAGACGG TGAGTCATTG CAGTTTGGCT CAGCCACGCT GGTGTGCATG AGTACGCCAG GTCACACAAG TGACAGCCTT AGTTACATTA TTGATGACAA TGTCTTCGTC GGCGACACGC TATTTATGCC TGACGGTGGC ACGGCAAGAT GTGATTTCCC TGGGGGCGAT GCAGGGTTGT TATGGGACAG CATAAACCGC CTTCATCACT TACCGGCACA TTACAAAATT TGGGTATGTC ATGATTACCA GCCCGACAAC AGAGAGCTAC AATATCAAAC GACAGTGGCG CAAAGCCAAG CGGCGAATAT TCATGTGAAT AATCAAATAG ATAAGGCGCA GTACGTGGCG CTTCGCAACA AACGAGATGC TACGCTGGCG GTGCCGAAAC TGCTGTATCC CTCCCTGCAA GTCAACTTGC AAGCAGGGAA GTTACCTCAA AAGCAGAGTA ACGGGCTGCG TTATATGTCT ATTCCGCTGA CGGATAAAAC ACAGTAG
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Protein sequence | MTVQVNGFYH DATGTVSYIV SDSERKHAVI IDSVLDFDLF SGEVSSTFAD KQLAFLHENQ LTLDWILDTH AHADHLSAAH YLHSKTGVKT CIGEGIKAVE ARFAKTFNFP PEEGHRFDAF DKLLQDGESL QFGSATLVCM STPGHTSDSL SYIIDDNVFV GDTLFMPDGG TARCDFPGGD AGLLWDSINR LHHLPAHYKI WVCHDYQPDN RELQYQTTVA QSQAANIHVN NQIDKAQYVA LRNKRDATLA VPKLLYPSLQ VNLQAGKLPQ KQSNGLRYMS IPLTDKTQ
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