| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0930 |
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| Symbol | |
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| ID | 4172137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1104718 |
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| End bp | 1106361 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053931 |
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| Product | X-Pro dipeptidyl-peptidase-like |
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| Protein accession | YP_660510 |
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| Protein GI | 109897255 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2936] Predicted acyl esterases |
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| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.280789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCACA TCCCAGTCGC TATGCGAGAT GGAATTGAAC TCGCAACCGA TGTTTATCTT
CCAAAAGAAA CGGGACATTT TCCAACACTT TTGATACGGG ATATATATAC CAATGGCTCT
GCAGCTGGGA GGCAAAAGTA CGCTAAATTT GCCACCACTA ACGGTTATGC GCTTGTCTTT
CAGTCTGTTC GTGGTAGGTA TGATTCGGAT GGAAAATGGT ATCCCTACTT TCAGGAAATA
AATGATGGTG ACGACACTCT TAGTTGGATC GCAAAGCAAA CCTGGTCTGA CGGTAAAGTT
GGCATGTTTG GGTCCTCGTA CTTAGCTTCG GTCCAATGGC TTGCTGCCGT GAATCGCAAC
CCCGCATTAG TGGCAATAGC ACCAGCCGTA AGCCCTGGGA ATTACTATCG CGATGTAGCA
TATCCCGGGG GGGCATTTTC GTTACTCTCA CGTGCTAGTT GGGGAATAGG GCTAGTTGGT
AGCAAAACAA ATATGTCGTT TCCGATCGAT TGGGTAAGTG AAATTAAACA TCTGCCACTT
AATACTTTGG CTGAAAGTAT CGGTTTCAAC GTTAAGCATT TTCAGGATTG GATTGATCAT
CCATCTGATG ATGCGTATTG GAAACCATTG AATTTAGAAG CGCGAGCTAA TGAAATGGCA
GTACCCGCGA TGAATATTGG CGGGTGGTAC GACGTTTTCT TGCGAAGCAC TATTGGTAGC
TATAAAACAA TGACTGAAGA GGCTGCAACT GAAACCGCGA GAAATGGACA ACGTCTTATC
ATTGGACCTT GGCCTCATGG ATGGAACCAG AAAACGAAAA TTGGTGACAT GCAGCTAGGT
GATAATTCCC TTATAGATGC ACCCGATATG TTGCTTGAAT GGTTCAACTA TTGGATGAAA
AGCGACGCTA AGCCAAATAG TTTAAATGAG AGCGACGCGC CAGTTAGAAT TTATGTTATG
GGAGAAAACG TGTGGCGGGA TGAACAGGAG TGGCCTTTAG CGAGAACTAC GTATCGTCCA
TTCTATATGC ATGCTGACAA TTCACTTTCT GAAGAGGCCT CAGCTGCTAA GTCAGCCAGT
ATGAAATATG ACTATGATCC AGCTGACCCT GTGCCGACGT TAGGCGGAAA TATTATGTCA
GCAAAATTAC GCGGACCTTT TGACCAAAAG CCACTAGATG GGCGGAAAGA TATCCTGAGA
TTTGTAACCG AACCCGTTAC GCAAGCAACA GAAATTACAG GCCCGATTAG TGCTGAAATA
TATGCTTCAA GCAGCGCTCC TGATACTGAC TTTATGGCAA AGTTAATTGT TGTTAAACCT
GATGGCAGCG CTCTTAATCT TGTCGATGGC GTTATTCGTG CTCGTTACAG AGAAGGTTTT
GATAAGCCTC AGTTGATCGA GCCAGGTAAG GTGTACAAGT ACAATATTGA TATGTGGGCA
ACCAGTTATA AGTTATCTCC TGGTGACCGT ATAAGAATTG ATATTACTAG CAGTAATTTT
CCAAGATTGG CTAGAAACTT AAATACAGGA GCCGGTTTTG CCAAGAGTTC TGAAATGAAA
ATTGCCAATC AAACAATCCA TATGAGTAAA AAGTATCCGT CAAAAATAGT GCTTCCAATC
ATTCCTACAG AAAGTGTGAA ATAA
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| Protein sequence | MYHIPVAMRD GIELATDVYL PKETGHFPTL LIRDIYTNGS AAGRQKYAKF ATTNGYALVF
QSVRGRYDSD GKWYPYFQEI NDGDDTLSWI AKQTWSDGKV GMFGSSYLAS VQWLAAVNRN
PALVAIAPAV SPGNYYRDVA YPGGAFSLLS RASWGIGLVG SKTNMSFPID WVSEIKHLPL
NTLAESIGFN VKHFQDWIDH PSDDAYWKPL NLEARANEMA VPAMNIGGWY DVFLRSTIGS
YKTMTEEAAT ETARNGQRLI IGPWPHGWNQ KTKIGDMQLG DNSLIDAPDM LLEWFNYWMK
SDAKPNSLNE SDAPVRIYVM GENVWRDEQE WPLARTTYRP FYMHADNSLS EEASAAKSAS
MKYDYDPADP VPTLGGNIMS AKLRGPFDQK PLDGRKDILR FVTEPVTQAT EITGPISAEI
YASSSAPDTD FMAKLIVVKP DGSALNLVDG VIRARYREGF DKPQLIEPGK VYKYNIDMWA
TSYKLSPGDR IRIDITSSNF PRLARNLNTG AGFAKSSEMK IANQTIHMSK KYPSKIVLPI
IPTESVK
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