Gene Patl_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0926 
Symbol 
ID4172133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1101746 
End bp1102555 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content47% 
IMG OID638053927 
Productseptum site-determining protein MinD 
Protein accessionYP_660506 
Protein GI109897251 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0213983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAAAA TTATAGTGGT AACGTCCGGT AAAGGTGGCG TAGGGAAAAC AACAACAAGC 
GCAGCGATAG CAACAGGCTT AGCGATGCGT GGCTTTAAAA CCGTGGTAAT CGATTTTGAT
GTGGGCTTGC GAAACCTAGA CTTGATCATG GGTTGTGAGC GCCGTGTGGT GTATGACTTT
GTGAACGTCA TCAAAAAAGA AGCCACATTG AATCAAGCGT TGATCAAAGA CAAACGCACC
CCAGGTTTGT TTATTTTGCC AGCGTCGCAA ACGCGGGACA AAGACGCCCT GTCGATGGAA
GGCGTGCAAA CCGTGCTAGA GAACCTAGCC AAAGACTTTG AGTACATCAT ATGTGACTCA
CCAGCAGGGA TTGAGCAGGG TGCGCAAATG GCCTTGTACT TCGCGGATGA AGCGATTGTG
GTAACGAACC CTGAAGTATC ATCGGTGCGA GATTCAGATC GCATTATCGG TATTTTGCAA
AGCAAATCAC TTAAAGCAGA GCAAGGCGGA ACGGTCAAAG AGCACTTGTT GCTTACCCGA
TATAACCCAG AGCGCGTTGC CTCAGCAGAA ATGCTCAGTG TAGCGGATGT TGAAGATATT
CTGGCTGTAC CTTTGCTTGG CGTTATTCCT GAGTCTGAAG CGGTATTAAA AGCATCTAAC
CAAGGTGCAC CGGTTATTTT AGATCAAGAG TCTGAAGCGG GTCAGGCTTA TCTTGATGCT
GTGTCACGGT TGCTTGGCGA AGACGTCAAA CACCGTTTCC TTGATGTACA GAAAAAAGGA
TTCTTGAAGC GATTACTAGG AGGTAAATAG
 
Protein sequence
MAKIIVVTSG KGGVGKTTTS AAIATGLAMR GFKTVVIDFD VGLRNLDLIM GCERRVVYDF 
VNVIKKEATL NQALIKDKRT PGLFILPASQ TRDKDALSME GVQTVLENLA KDFEYIICDS
PAGIEQGAQM ALYFADEAIV VTNPEVSSVR DSDRIIGILQ SKSLKAEQGG TVKEHLLLTR
YNPERVASAE MLSVADVEDI LAVPLLGVIP ESEAVLKASN QGAPVILDQE SEAGQAYLDA
VSRLLGEDVK HRFLDVQKKG FLKRLLGGK