| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0922 |
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| Symbol | |
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| ID | 4171976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1096774 |
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| End bp | 1097733 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053923 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_660502 |
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| Protein GI | 109897247 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACT TCAGAGTCAA AACACGCATC ACAGATATGC TCGGTATTGA AAAACCCATC
ATACAAGCAG CAATGGGGTG GATTGCACGC TCACAGCTTT CATCTGCGGT ATCGAACGCT
GGCGGCATGG GCATAATCGA AACCAGCTCT GGGGAGCTTG ATGCCATTCG CGAAGAAATT
TTAAAGATGC GTGACCTAAC CGACAAGCCT TTTGGTGTAA ATATTGCTCA GGCGTTTGTT
CGAGATCCTA AGATTTTGGA TTTCATTATC GATCAAGGCA TTAGGTTTGT AACCACCTCA
GCGGGTGACC CAACAAAATA CACCACCCAA CTAAAAGAGG CTGGCCTCAC CGTATTTCAT
GTTGTGCCGC ACCTTAAAGG CGCATTAAAA GCGGTTGAAG CAGGCGTTGA TGGGCTTATC
GTTGAAGGCG GCGAAGGCGG CGGTTTCAAG AATGCGGATG ACGTATCAAG TATGGTGCTT
ATTCCGCAAG TATGTGAAGC GGTAAACGTT CCTATTGTCG CAGCGGGGGG TATTATGGAC
GGGCGCAGTA TGGCCGCCGC CATGGCATTA GGTGCAGAAG GGGTGCTTAT GGGAACGCGT
ATTTTAAGCG CAACAGAAAG CCCGGTGCAC CAGAACTGGA AAAACGCCAT CATAGATGCC
GATTCAACTG ACACTGTGTT TCTTAATCGA ACTGGTCCTG GCCCTGCCCT TCGTGCCCTG
CGTACAGAAC GTTCAACGCG TATTCTGAAT GAAGGTTCAG CAAATATTTT CAGCGAATTT
CAAGATACCC AAGCCGTATA TTTCGGCGGT GACTTAGAAG CAGGAATAGC GCTAACAGGC
CAAGTTGCAG GGCGGATAAA AGAAACAAAA TCGATTAGGC AAATATTCGA TGAAACAATG
ATGGAGTTTG GCGAAGTGAC CGGACGTTTA GCCGCCTTAA GCAACCTATT AGAGCGTTAA
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| Protein sequence | MTDFRVKTRI TDMLGIEKPI IQAAMGWIAR SQLSSAVSNA GGMGIIETSS GELDAIREEI
LKMRDLTDKP FGVNIAQAFV RDPKILDFII DQGIRFVTTS AGDPTKYTTQ LKEAGLTVFH
VVPHLKGALK AVEAGVDGLI VEGGEGGGFK NADDVSSMVL IPQVCEAVNV PIVAAGGIMD
GRSMAAAMAL GAEGVLMGTR ILSATESPVH QNWKNAIIDA DSTDTVFLNR TGPGPALRAL
RTERSTRILN EGSANIFSEF QDTQAVYFGG DLEAGIALTG QVAGRIKETK SIRQIFDETM
MEFGEVTGRL AALSNLLER
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