| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0897 |
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| Symbol | |
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| ID | 4172943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1068862 |
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| End bp | 1070025 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053898 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_660477 |
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| Protein GI | 109897222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.129101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTA CTCAAGTTAT TAGCCACGTT TTACAGTACG ACTTAGACGA AGAATTAGGG
TATTCCCAGC AATATTATTT TAAGCGCACG ACGCACCTAG TCGAGATCCG CACGGATATT
GGCGTGACAG GTTGGGGGGA GTGTTTTGGC GGCGGCAATA TTGCGCTAGC CAATAAAACC
ATTGTTGAGA AAGTGATTCA GCCGATGATA TTGGGCATGA ATCCACTAGA TCGCGAAGTG
ATCTGGCACA AAGCTTATAA CTTGATGCGT GACCACGGCC AAAAAGGCAT GCCTATTCAA
TCTTTGTCAG GCATTGATAT CGCGTTGTGG GACATCGCAG GTAAAATTCA TAATGTTCCT
GTTTATCAAT TGCTTGGTGG TGCCTTTAGA GAGAAAATTG GTGTTTACGG TTATGGCATG
ATGTTACAGC GCGTACCGGA TTTAGAGCAC AGATTTGAGC TTGAAAGCGC CGCTATTTTA
GACAAAGGTT TCAAAGCCAT GAAAATGAAG ATTGGCCTTG GGGTGGAAAA AGACGTGCGC
TTAGTAGAAG CCGTGCGTAA ATCCATTGGG CCAGATGTGC CATTAATGGT CGATGCCAAT
CATGCTTACA CAACACGTGA AGCAATACCT TTAGGGCGCG AATTAGAGCG TCTAGGCGTC
GCTTGGTTTG AAGAGCCTGT TGCACCAGAA GATTTACAAG GCTACCGCGA TCTATGCGAG
GCCCTTGATG TAAACATTGC CGGTGGTGAA GGGGAGTTCA CTGTGTGGGG ATTCCGAGAT
TTAATTAAAA ATCGCTGCGT AGACATACTC CAACCAGAAG TGTGTGGCCT AGGCGGGATT
ACCCATTACC AAAAGGTACT GGCGATGGCT CAAGCTCATT TTGTGCCTGT TGTGAACCAT
GTTTGGGGGT CAGCTGTTGC GGTTGCCACT AATATGCATC TGTTGGCAGC ATTGCCGGAC
TTCCCTGGAG CGGCCCACCC AGTCCAACCT ATGCTCGAAT ATGACACGAC CCCTAATCGC
TTCCGTGAGG AGTTATTGGT CGACTCATTA GAGATAAACG AACAAGTGAA ACGCAATGAT
GGTTTTGTTG CATTGCCTAA AGGCCCGGGT CTTGGGATTG AGCCAAACCT CGACTTCATT
AAAAAATACT CAGTAGGGTA TTAA
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| Protein sequence | MKITQVISHV LQYDLDEELG YSQQYYFKRT THLVEIRTDI GVTGWGECFG GGNIALANKT
IVEKVIQPMI LGMNPLDREV IWHKAYNLMR DHGQKGMPIQ SLSGIDIALW DIAGKIHNVP
VYQLLGGAFR EKIGVYGYGM MLQRVPDLEH RFELESAAIL DKGFKAMKMK IGLGVEKDVR
LVEAVRKSIG PDVPLMVDAN HAYTTREAIP LGRELERLGV AWFEEPVAPE DLQGYRDLCE
ALDVNIAGGE GEFTVWGFRD LIKNRCVDIL QPEVCGLGGI THYQKVLAMA QAHFVPVVNH
VWGSAVAVAT NMHLLAALPD FPGAAHPVQP MLEYDTTPNR FREELLVDSL EINEQVKRND
GFVALPKGPG LGIEPNLDFI KKYSVGY
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