Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0895 |
Symbol | |
ID | 4172941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1065590 |
End bp | 1067005 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638053896 |
Product | sulfatase |
Protein accession | YP_660475 |
Protein GI | 109897220 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.281969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAG TTTTTCATCG CGTTGTAGCA GCGCTTTCTA TCAGTGTGGC GTGCACTTCG TTAAGTTACG CCAAGCAACC GAATATCGTT TTTCTGTTTT CCGATGATGC AGGGTATGCT GACTTTGGTT TTCAAGGCAG CGAAACAATG AAAACACCCA ATTTGGATCA GCTTGCTAGC GAAGGTGTTA GATTTACCCA AGGTTATGTG TCGGACTCTA CTTGCGGCCC ATCTCGGGCG GGCATCATGA CAGGGCGCTA CCAGCAAAAA TTCGGTTACG AAGAAATAAA CGTGCCGGGT TATATGAGTG AGCACTCTGC TATAAAAGGG GCAGAAATGG GGATCCCGTT AGATGAAGTC ACTATGGGTG ACTACATGAA ATCTCTTGGG TATCGCACGG CGTTCTACGG TAAATGGCAC TTAGGTGGTA CGGATGAATT GCACCCTATG CACCGTGGCT TCGACGAATT TTATGGCTTT CGCGGCGGCG ATCGCAGCTA CTGGGCCTAT GAAGTCAATG CCCCTGAGCG CAAATCTGCC GTATTTACTG ACAAAAAACT TGAACACGGT ATTGATCAAT TTCAAGAGCA CGAAGGGTAT TTGACCGATG TGTTAGCCGA GAAAGCCAAT CAATTTATTG AAAAAGCGCC TGATAAACCG TTCTTTATTT TCTTATCATT TAACGCAGTG CATACACCAA TGGAAGCCAC GCCAGAAGAT TTAGCGAAGT TTCCTCAGTT AAAAGGCAAG CGCAAGGAAG TTGCAGCCAT GACCCTCGCA CTTGATAGAG CCAGCGGAGC AGTGCTAAAC AAACTCAAGG AGCTGGGTTT GGAAGATGAC ACTCTTGTGG TGTTCAGCAA CGACAATGGC GGCCCTACGG ATAAAAACGC CTCATCTAAC TACCCATTAG CAGGGACTAA ATCAAACTTT TTGGAAGGGG GAATACGCGT GCCTTTTCTG GTTAAATGGC CTGCTAAGCT AGCTGCTGGA AAGGTATACG ATAAACCCGT CAGTACGCTC GACTTATTAC CCACATTCTT TAAAGCGGGT GGCGGTGAAG AGGTGATGTC TGAATTGGAT GGCGTGGATT TGATGCCTTA TATAACAGGC CAAAATAACA AGGCACCTCA CGAGAGCATG TACTGGAAAA AAGAAACTCG CGCAGCTATT CGCCAAGGAG ATTGGAAGTT ATTGCGCTTC CCAGACCGTC CTGCAGAATT GTATAACCTT GCTAATGACA TTGGTGAACA ACATAACTTA GCCGCCCAAG AGCCTGAGCG TGTTAAGCAA ATGTACAAAG ATTTCTTCAG TTGGGAAATG ACACTAGAGC GCCCATTATG GTTGCTTAAG CGCCAGTTTG AGGAATACGA TTTAAATCGC ATGGACAAGT ACCGCGTACC AAAACGCTTA GAATAA
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Protein sequence | MKSVFHRVVA ALSISVACTS LSYAKQPNIV FLFSDDAGYA DFGFQGSETM KTPNLDQLAS EGVRFTQGYV SDSTCGPSRA GIMTGRYQQK FGYEEINVPG YMSEHSAIKG AEMGIPLDEV TMGDYMKSLG YRTAFYGKWH LGGTDELHPM HRGFDEFYGF RGGDRSYWAY EVNAPERKSA VFTDKKLEHG IDQFQEHEGY LTDVLAEKAN QFIEKAPDKP FFIFLSFNAV HTPMEATPED LAKFPQLKGK RKEVAAMTLA LDRASGAVLN KLKELGLEDD TLVVFSNDNG GPTDKNASSN YPLAGTKSNF LEGGIRVPFL VKWPAKLAAG KVYDKPVSTL DLLPTFFKAG GGEEVMSELD GVDLMPYITG QNNKAPHESM YWKKETRAAI RQGDWKLLRF PDRPAELYNL ANDIGEQHNL AAQEPERVKQ MYKDFFSWEM TLERPLWLLK RQFEEYDLNR MDKYRVPKRL E
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