Gene Patl_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0895 
Symbol 
ID4172941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1065590 
End bp1067005 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content46% 
IMG OID638053896 
Productsulfatase 
Protein accessionYP_660475 
Protein GI109897220 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3119] Arylsulfatase A and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.281969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAG TTTTTCATCG CGTTGTAGCA GCGCTTTCTA TCAGTGTGGC GTGCACTTCG 
TTAAGTTACG CCAAGCAACC GAATATCGTT TTTCTGTTTT CCGATGATGC AGGGTATGCT
GACTTTGGTT TTCAAGGCAG CGAAACAATG AAAACACCCA ATTTGGATCA GCTTGCTAGC
GAAGGTGTTA GATTTACCCA AGGTTATGTG TCGGACTCTA CTTGCGGCCC ATCTCGGGCG
GGCATCATGA CAGGGCGCTA CCAGCAAAAA TTCGGTTACG AAGAAATAAA CGTGCCGGGT
TATATGAGTG AGCACTCTGC TATAAAAGGG GCAGAAATGG GGATCCCGTT AGATGAAGTC
ACTATGGGTG ACTACATGAA ATCTCTTGGG TATCGCACGG CGTTCTACGG TAAATGGCAC
TTAGGTGGTA CGGATGAATT GCACCCTATG CACCGTGGCT TCGACGAATT TTATGGCTTT
CGCGGCGGCG ATCGCAGCTA CTGGGCCTAT GAAGTCAATG CCCCTGAGCG CAAATCTGCC
GTATTTACTG ACAAAAAACT TGAACACGGT ATTGATCAAT TTCAAGAGCA CGAAGGGTAT
TTGACCGATG TGTTAGCCGA GAAAGCCAAT CAATTTATTG AAAAAGCGCC TGATAAACCG
TTCTTTATTT TCTTATCATT TAACGCAGTG CATACACCAA TGGAAGCCAC GCCAGAAGAT
TTAGCGAAGT TTCCTCAGTT AAAAGGCAAG CGCAAGGAAG TTGCAGCCAT GACCCTCGCA
CTTGATAGAG CCAGCGGAGC AGTGCTAAAC AAACTCAAGG AGCTGGGTTT GGAAGATGAC
ACTCTTGTGG TGTTCAGCAA CGACAATGGC GGCCCTACGG ATAAAAACGC CTCATCTAAC
TACCCATTAG CAGGGACTAA ATCAAACTTT TTGGAAGGGG GAATACGCGT GCCTTTTCTG
GTTAAATGGC CTGCTAAGCT AGCTGCTGGA AAGGTATACG ATAAACCCGT CAGTACGCTC
GACTTATTAC CCACATTCTT TAAAGCGGGT GGCGGTGAAG AGGTGATGTC TGAATTGGAT
GGCGTGGATT TGATGCCTTA TATAACAGGC CAAAATAACA AGGCACCTCA CGAGAGCATG
TACTGGAAAA AAGAAACTCG CGCAGCTATT CGCCAAGGAG ATTGGAAGTT ATTGCGCTTC
CCAGACCGTC CTGCAGAATT GTATAACCTT GCTAATGACA TTGGTGAACA ACATAACTTA
GCCGCCCAAG AGCCTGAGCG TGTTAAGCAA ATGTACAAAG ATTTCTTCAG TTGGGAAATG
ACACTAGAGC GCCCATTATG GTTGCTTAAG CGCCAGTTTG AGGAATACGA TTTAAATCGC
ATGGACAAGT ACCGCGTACC AAAACGCTTA GAATAA
 
Protein sequence
MKSVFHRVVA ALSISVACTS LSYAKQPNIV FLFSDDAGYA DFGFQGSETM KTPNLDQLAS 
EGVRFTQGYV SDSTCGPSRA GIMTGRYQQK FGYEEINVPG YMSEHSAIKG AEMGIPLDEV
TMGDYMKSLG YRTAFYGKWH LGGTDELHPM HRGFDEFYGF RGGDRSYWAY EVNAPERKSA
VFTDKKLEHG IDQFQEHEGY LTDVLAEKAN QFIEKAPDKP FFIFLSFNAV HTPMEATPED
LAKFPQLKGK RKEVAAMTLA LDRASGAVLN KLKELGLEDD TLVVFSNDNG GPTDKNASSN
YPLAGTKSNF LEGGIRVPFL VKWPAKLAAG KVYDKPVSTL DLLPTFFKAG GGEEVMSELD
GVDLMPYITG QNNKAPHESM YWKKETRAAI RQGDWKLLRF PDRPAELYNL ANDIGEQHNL
AAQEPERVKQ MYKDFFSWEM TLERPLWLLK RQFEEYDLNR MDKYRVPKRL E