| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0885 |
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| Symbol | |
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| ID | 4172014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1044832 |
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| End bp | 1047258 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053886 |
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| Product | hypothetical protein |
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| Protein accession | YP_660465 |
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| Protein GI | 109897210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.145149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATC ATCTTTTAGG GGCAAGTATT GCTTCAGCAC TCATACTTAG TTTAGGTTGC
AGCCAATCAA CCGAACCTAA ACAGGTATTG GAAATAGCGA CCGAAAAAGT TGAATCTGTC
AGCCCACTTG AGCAACAAGC TAAAGCAAAA TTGGACAAGC TCAAAGGTAT GATGGACGAA
GCACGAAGCA AGAAAATAGA CGTTACCCGA GAAGAAACGC TAGTGTGGTT TTCTGAGCAG
TTTATCAAAT TCGCGAATTG GGATGAAGCG AACCCTAAAG CAATTGAAGC CGCTTTTGGG
TACGAACGTT ATTACGCTGC CGATAAAGTT GAATTAGCAG CTTCTTTACC TGACTTCGAA
CGCCAAAAAG TAAACGAAAT TTTAGATAAA GGCATAACGG TGCTCGCACA AGTACTACGC
GGTGACATAA AACGCCGACC AGTAAACAAG GTTGATTGGC AGGGTACCAA AGCTGGCGAC
AATATGTTTG TGAGTAATGG GAAACCTATC TTCCCTTACG ATTACTTTTC TAAATCGGTT
GGCCAACCAC TGACCAATAC CGACGTGTAT AACGACCATT TAGGTGCACT ATACCACGGT
GGTGAAAACC TCTATCCAGT AGATCATGAC CGCGCCATTA ACTCCTTTTT ATTGAAGGAA
GACGGGACCT TTGACGAAGA ACTGATGAAG GAACTCACCG ATATTCCTGA TACGAATATT
GGCTTCCTAT ATTACTGGAT CATGGGGATC CCAGAGTGGG TTGAAAAGCA AGAACCTGAA
GTACGTAAGG GTCGTTCACT CTTTACCGGA TTCGACATAG ACAACCCTTT AGCACGTGAT
TTGTGGGGTA AAATCATCCG TAGAACAGGT GAGCTAACAA AAGGCAAAAA AGTAACAGAG
CTGGGCTTTG TGCTGGCTAA TGAACCTCAT TGGTTTGCAG AAAAAGACTT TTGGACCGCT
CGCTTCGACG AGATGACTTC AATTTCCTCC TACACACTCA ACAATTTCCG CACTTGGCTA
AACGATAAGT ACGAAGGCGA CTTAGCTCAG CTTAATGCCA ATTGGCGAGC CGACTTTGCG
AGTTTCGATG ATGTGACTAT CGACATACCG ATAGATCCTG CTTTGCAAGG CCAGCCAATT
TGGTTTGACT GGTCACGTTA CAACATGGAT AGAAGTACTA ACTGGTTTGC ATTTATGCAA
AATCAGTTAC ATTCAGTTAA TCCAGATGCC GACACGCATA TTAAAATAAT GCCGCGTATG
TTTATGGATA ATGTTCGCTC AGGTGGCATA GATACCGAAG CATTAGCGGA ATTAACCACC
ATGGTAGGCC ATGATGCTAA ATCATTTGGC AGCAAGAATA TTAGGCCAGG TAAATCCTCA
AAATGGATGG AAAAGTACGC TTATTACTGG GGATACGTTG CCATGTTCCA CGACTTTATG
GAGTCAGTGG CACCAAATAA AATTAATGTT AACTCAGAAT CACATTTCTT ATCGTCAGGC
CAATGGCGCG ATTTAGACAC TCGCCCAAGC TATGTTCGCA GTGTCTATTG GTTGGCCACA
TTACTAGGAA TGGATGCCAA CACCGGTTGG TTTTGGGCGC GGGATCCCGA CGGCTCCCCT
GAGGACAGAT TAGAAGGCGA GTTAGACTTT TTCGATCCAG GTTTGGCTGG TGCCTATGCT
GGGTCTAACA ACATGCAACC TCAAGTCACC AATGAAGTGA CTCAGGTGAT GTTTGACTTG
AATAGTTTTT CAGAAGAGAT CATCGAACTG CGGGAACAAC CTCGTCCGCT ACGTTTGTTT
TACTCTGAAA CTACAGCCAT CAACACTGAT GACTACATGA CCAAAGGGTA CAAGCTCTAT
GAAGAGCTGT TTTTTGAAGG CTTACCGTTG GGCTTTGTCA CCAAAAATAT TATTGAAAAA
CAAGACAATA GCGCTTGGGA TACGGTCATT GTTTACAACA ACCCAAATGT GAGTGACGCT
GAATTTGCTG CATTACAGTC TTATTTAGAG CAAGGCGGTA CCGTCATTCT CGATACTAAA
AGCTTGCAAT TTAACGAATA CGGCCAAATC CGCAAACAGT CACTGAAAGC AAGTAAAGGG
AAACTAATCG CACTTGAGGC AGAAGCTGAT ATTGCAAAAA TCAAGCAAGT GGCTCTAGCA
GAAATTGCCG ACAGCATGCC TGATATTTTG CTAAAAGAAG ATAACGGCGA GCCGTTCAAA
ACGACCACAT GGCGCACAAT CAAACAGCCT GACGGTAGCT ACCTAGTGAA TATTCTGAAT
GTTGGGCGTA ATGTCGCCAA GCTTGAATTA TCACTGGCAA ATGGAAAGCC TGCGATCCTC
ACCAACATGA TGACCAGCAA TCCAATAAAT AGCCATTTCG AACTTGAGTC AGAAGGCGTA
TTGCTGCTAA AAGTCTCCCC TCAATAA
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| Protein sequence | MKHHLLGASI ASALILSLGC SQSTEPKQVL EIATEKVESV SPLEQQAKAK LDKLKGMMDE
ARSKKIDVTR EETLVWFSEQ FIKFANWDEA NPKAIEAAFG YERYYAADKV ELAASLPDFE
RQKVNEILDK GITVLAQVLR GDIKRRPVNK VDWQGTKAGD NMFVSNGKPI FPYDYFSKSV
GQPLTNTDVY NDHLGALYHG GENLYPVDHD RAINSFLLKE DGTFDEELMK ELTDIPDTNI
GFLYYWIMGI PEWVEKQEPE VRKGRSLFTG FDIDNPLARD LWGKIIRRTG ELTKGKKVTE
LGFVLANEPH WFAEKDFWTA RFDEMTSISS YTLNNFRTWL NDKYEGDLAQ LNANWRADFA
SFDDVTIDIP IDPALQGQPI WFDWSRYNMD RSTNWFAFMQ NQLHSVNPDA DTHIKIMPRM
FMDNVRSGGI DTEALAELTT MVGHDAKSFG SKNIRPGKSS KWMEKYAYYW GYVAMFHDFM
ESVAPNKINV NSESHFLSSG QWRDLDTRPS YVRSVYWLAT LLGMDANTGW FWARDPDGSP
EDRLEGELDF FDPGLAGAYA GSNNMQPQVT NEVTQVMFDL NSFSEEIIEL REQPRPLRLF
YSETTAINTD DYMTKGYKLY EELFFEGLPL GFVTKNIIEK QDNSAWDTVI VYNNPNVSDA
EFAALQSYLE QGGTVILDTK SLQFNEYGQI RKQSLKASKG KLIALEAEAD IAKIKQVALA
EIADSMPDIL LKEDNGEPFK TTTWRTIKQP DGSYLVNILN VGRNVAKLEL SLANGKPAIL
TNMMTSNPIN SHFELESEGV LLLKVSPQ
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