Gene Patl_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0882 
Symbol 
ID4172011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1042701 
End bp1043162 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content45% 
IMG OID638053883 
Producthypothetical protein 
Protein accessionYP_660462 
Protein GI109897207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATTTCC CGCTGTGTAC GGCATACGTT GACCTAAATC CTATACGCGC AAAAATGGCA 
GAAAAACCCG AAACGGCAAG TCACACCAGT ATTAAAAAGC GGATCGACGC GGCTAAAAAT
CAACAGTCGC AGCCTAGCGC CTTGATGCCC TTTGTGGGCT GCTATCGTAA AGAAATGCCC
AAAGGTCTCA CGTATTTACT CAATGATTAT TACGAGCTTA TAGATACCAC AAGCCGCTGC
ATTCGTGATG ATAAGACAGG TTATATGGAT AATAAGCAAA GTCTTATTTT AGAAAGACTC
GGGTTAGGCA CGGCGCAGTG GCTAACCCTA TCCACTGAGT TCGAAAAGCA TTTTTGCTAC
GCCGCAGGTG CGGAGCAAAT GATGAGCATG TTCAAGCGTC ATACCCACCA TCAGAGACTG
CGAGGGATGG GTAAAGCCAA AGAGTTGTTA AAACAAGCAT AA
 
Protein sequence
MYFPLCTAYV DLNPIRAKMA EKPETASHTS IKKRIDAAKN QQSQPSALMP FVGCYRKEMP 
KGLTYLLNDY YELIDTTSRC IRDDKTGYMD NKQSLILERL GLGTAQWLTL STEFEKHFCY
AAGAEQMMSM FKRHTHHQRL RGMGKAKELL KQA