Gene Patl_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0878 
Symbol 
ID4172007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1036136 
End bp1036765 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content44% 
IMG OID638053879 
Producthypothetical protein 
Protein accessionYP_660458 
Protein GI109897203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000000556946 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAT ATTCAGCGTG TAAAAAGCTC GTAAAACCAA TGTTTTTGGT TGGCGGATTG 
CTGCTCAGCA GCGGTGCCTC TGCCGGCCTA ATTAATGGGG GCTTTACTGA CGGGCTAAAC 
GGCTGGTCAG GAGATGTTAA CTATTACAAC GTCAATGCCG ATGAAGAAGT GGCAACCTAT 
GACATCAACT TAAACGACTA TTCGGATAAC TATTTCACTG GCTTAAACAG CGTCACACTC 
AACACTTCTG CCGATTCAAG CGCAGAATAT TGGGGTATTT ATTTGTTTCA AACATTTATG 
GTTGCTGATA ACTCGTCATT TATTTCATTG GCATTTGACT CAATAGCGGA CAGCGCTTAT 
GTCACTCTTG TTGATGATAA TGGCGACCTT CTACATGACT TTATGCTTGA CGGTTTAAGT 
GCCGATATCA GTGCGCTAGC AGGCGCTTCA GTTGCTTTGG AATTTGGTAT TGAAGACTTT 
AACTACGATT ACGATGACTA CTTAACCGTG TCCAATATTT CTATTAGCCA ACGTGCTAAC 
GCGGTATCTG CACCCAGCAC CTTTACTCTT TTCCTGCTGG GATTGCTCGC GATCAGGCAA 
ACGTCTGCTT CTCGAAAGCC TGCATTCTAA
 
Protein sequence
MNTYSACKKL VKPMFLVGGL LLSSGASAGL INGGFTDGLN GWSGDVNYYN VNADEEVATY 
DINLNDYSDN YFTGLNSVTL NTSADSSAEY WGIYLFQTFM VADNSSFISL AFDSIADSAY 
VTLVDDNGDL LHDFMLDGLS ADISALAGAS VALEFGIEDF NYDYDDYLTV SNISISQRAN 
AVSAPSTFTL FLLGLLAIRQ TSASRKPAF