| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0867 |
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| Symbol | |
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| ID | 4171996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1023142 |
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| End bp | 1024215 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053870 |
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| Product | Rieske (2Fe-2S) region |
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| Protein accession | YP_660449 |
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| Protein GI | 109897194 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCCAT TTAAATATAA AAGTTCAATC GTGCGCAACC GTTGGTATAT GGCGGCATTT
TCAACCGAAA TAACCCGTGA GCCAATGGAA CGCACCATGC TAAACAAGCC TGTGGTTATG
TATCGTAAAG AAGATGGTAC GCCCGTTGCC ATGTATGGCT TATGCCCCCA CCGTTATCTA
CCTCTGGTGC AAGGTCGCGT TGAAGGCGAT GCTATTGTGT GTGGTTACCA CGGGTTCAAA
TTTGCTGATA CTGGCGAGTG CATTCAAATT CCTTCGCAGC CAAAAGTCAC AGGTAGAATC
TGCCAGCCAG TGTATAAAAT TATAGAAAAA GGCCCAATTT GTTGGATTTG GATGGGCGAT
GAAGACAAAT GTGATATCGA TTTAATTCCG CCCTACGAAG ATTTTGGTTT GGATCAGCCA
GGCTGGGATT TCCACTCGGC TAATTATTTT CATCTTGAAG GCCGCTCTCA GTTATTGGTC
GATAACTTAA TGGACCTTAC CCACCTTCCT TATGTGCATC ACCATATCGC AGGGAAAGAT
TCGATGGCAG ATATACCCAT TGTCACTGAA GAGCGTGAAA GAAGTTATCG CATAACACGC
AATGGCAAGG CCCCCTGGAA TGATTATTTC AAGATGGTCT TTGGCCCAGA AGCTGAATTC
GAGGGTGTAT GTGATTTTAT GATCAAGAGC GATTTTTTCG GTCCTGAATT CATGTCCACA
AGTCTACCCA TTATCACGGC AGTGCCTGGC AAAAGTGAGG TTCCCAAAGA GTTGGGTTCG
TTGATGATAC TTCATGGTGC TACCCCTGAA ACCGACACGA CAACTCACTA TTTTGGGTTT
TCTACGCGTA ATTTCAGGTT AGGTGATGAA AGCTTAAACC AATTCCAACT TGCCGCCGAT
CAGAAAATCC GTGCCCAAGA CCAGGTAGCG ATCAACGCTG TAGAAAAGAG GCTCGATTTT
GCGGTCACTC AACAACGAGA ACTGTTAGTT GGAGCAGACA AGCCTGCGGT TCAGGTTAGA
AGAAGGATTG AAGCCATGCT GGCGGAAGAA AATGTGCCTT TAGCTGACGC ATAA
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| Protein sequence | MYPFKYKSSI VRNRWYMAAF STEITREPME RTMLNKPVVM YRKEDGTPVA MYGLCPHRYL
PLVQGRVEGD AIVCGYHGFK FADTGECIQI PSQPKVTGRI CQPVYKIIEK GPICWIWMGD
EDKCDIDLIP PYEDFGLDQP GWDFHSANYF HLEGRSQLLV DNLMDLTHLP YVHHHIAGKD
SMADIPIVTE ERERSYRITR NGKAPWNDYF KMVFGPEAEF EGVCDFMIKS DFFGPEFMST
SLPIITAVPG KSEVPKELGS LMILHGATPE TDTTTHYFGF STRNFRLGDE SLNQFQLAAD
QKIRAQDQVA INAVEKRLDF AVTQQRELLV GADKPAVQVR RRIEAMLAEE NVPLADA
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