Gene Patl_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0859 
Symbol 
ID4173708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1011341 
End bp1012471 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content46% 
IMG OID638053862 
Producthypothetical protein 
Protein accessionYP_660441 
Protein GI109897186 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCAA GCGTAGAAAA AGTCCTTATC ATCGGTGGCG GATTTTCAGG TATGTCAGCA 
GCCATTGAAT TAAGAAAATA CGGTATAGAA ATTGATTTAG TCGAAATAGA TCCCAATTGG
CGAGCCGATG GTGCGGGTAT CAGTATCGGT GGAGCCACCT TACGGGCTTT TAAAACGTTG
GGTATTTTAG AGGAATTCTT AAAAGTGGGC AGTGCCCATA GCGGACTAGA TATACATGCA
CCCCATGGTT TGCATTTGGC GCATATCCCA ACACCCGTGA TGGGTGATCC CGATGTTCCC
AACTCAGGTG CTATTATGCG ACCTGCTTTG GCCAAAATAT TAGCAGAGAA AACCCGGCAG
TCGGGCGCCA ATGTAAGACT GGGGTGCACC TTCACCGAGA TGTCACAAAC CGAAAGTGGG
GTTGATGTTA CTTTTACCGA TGGCACATCA AACCGTTACG ACTTGGTCAT AGGCGCAGAT
GGTATGTTTT CAAAAGTGCG CAGTACCTAT TTTCCGGAAG CTGAAGAGCC TAAGTATGTA
GGACAAGGAA TTTGGCGTGC GGTGTTACCA CGCCTTCCTG AAGTGAAAAA CACTATGATG
TGGGTAGGGC CACATTTAAA AGTAGGGGTA AATCCTATGT CTAAGGATGA AATGTACCTA
TTTTTGACCG AAGACAAAAA AGAACGGCAA CATGTTGAGC CCGCCGATTT TTTGGAAAAA
CTAAAAGCCT TAATGGCGAC CTTTCCCGCT CCTATTATCC AGCAGCTAAA AGCTATGCTG
AACGAAGATT CACTGATTGA TTTTCGTGCT ATCGGAAAGT TACTTGTGCC TGCTCCGTGG
TATAAAAATC GTATCGTTTT AATTGGCGAT ACGGTGCATG CGACTACGCC TCATTTAGCG
TCAGGCGCTT GTATTGGTAT TGAAAGTGCC ATTGTCTTAG CAGAAGAATT ATCCAAAGAT
GTGAGTCTGG AAAAAGCACT TGCCGCATTT CAAGAGCGAC GTTGGGAACG TTGTCGTATG
GTGGTGGAAA ACTCGGCTCG ATTAGCCCAG ATAGAAATAG AGGGCGGCGA TAAGCAAGAG
CATACTGAAA TTATGCGCGA ATCTATGATG GCCTTGGCGC AGCCGATTTA A
 
Protein sequence
MNPSVEKVLI IGGGFSGMSA AIELRKYGIE IDLVEIDPNW RADGAGISIG GATLRAFKTL 
GILEEFLKVG SAHSGLDIHA PHGLHLAHIP TPVMGDPDVP NSGAIMRPAL AKILAEKTRQ
SGANVRLGCT FTEMSQTESG VDVTFTDGTS NRYDLVIGAD GMFSKVRSTY FPEAEEPKYV
GQGIWRAVLP RLPEVKNTMM WVGPHLKVGV NPMSKDEMYL FLTEDKKERQ HVEPADFLEK
LKALMATFPA PIIQQLKAML NEDSLIDFRA IGKLLVPAPW YKNRIVLIGD TVHATTPHLA
SGACIGIESA IVLAEELSKD VSLEKALAAF QERRWERCRM VVENSARLAQ IEIEGGDKQE
HTEIMRESMM ALAQPI