| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0852 |
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| Symbol | |
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| ID | 4173701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1004702 |
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| End bp | 1005769 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053855 |
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| Product | Rieske (2Fe-2S) region |
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| Protein accession | YP_660434 |
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| Protein GI | 109897179 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.467283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCCCT TCAAATATAA AACATCAATT GTACGTAATC GTTGGTATAT GGCGGCGTTT
TCTAACGAGA TATCACGTGA GCCGATGGAG CGCACGATAC ACAGTAAACC TGTTCTAATG
TATCGAAAAG AAGATGGATC GCCGGTGGCA ATGCATGGGC TGTGTCCACA TCGGTATTTT
TCGCTCGTTA AGGGGCGAGT TGAGGGCGAC AATATCGTCT GCGGGTATCA TGGTTTTACC
TTTGCCGATA ATGGCGATTG TATTGATATT CCTTCCCAAG ACACCGTTCC GCGTAATTTC
TGCCAACCCG TTTATCCCAT AGAGGAGCGC GGGCCTATTT GCTGGATATG GATGGGGGAC
CTAGATACGT GTGACACTGA TTTAATTCCT CCCTATCATG ATTTTGGTTT AGACAACCCA
GATACCTATT ACAGTTCTGA AAATTATTTT CATGTGAAAG GTCGCTCTCA GCTATTAGTC
GATAATTTAA TGGATCTTAC CCACCTGCCT TATATTCATC AGCAATTAGG CAAAGGCGGA
GATACACTGA AAAAAATCCC GATGGAGACA CAGGAGCGTT CCCTAAGTTA TAGGGTGCTC
AGAAACGGAA AAATGCCATG GAATCCTTTT TTGGAAATAG TCTACGGAAA AGACGCCAAG
TTCGAAGGGT TAGCCGACTT TGTGCATTTG AGTGATTTTT ATGGCCCAGA ATTGGTCAAA
ACTAGCTTAC CCACCATTAC CAAGATCCCG GGTAAAGAGG ATATACCCAA AGAGTTGGGG
CATATGGCCA TATTGCACGG ACTGACACCT GAGACTGAAA CAAGTACGCA CTATTTTGGT
TTCTCTACGC GAAATTTCCG ACAAGGTGAT ACGGCGCTAG ACAAATTTCA GTTTGAGTCT
GAAATGCAAG TTAGACAACA AGATGTTGAC GCGATTGAAG ACATGGAAAA ACGCATCGAT
GCAGCCGCTT TGTTTCAGCG AGAACTGATC GTAGGCGCTG ATAAGGCGGC CATTCAGGCG
CGAAGAAAAG TTGATGGCAT GTTAGCCGCG GAAAATCTTG AGCCATAA
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| Protein sequence | MYPFKYKTSI VRNRWYMAAF SNEISREPME RTIHSKPVLM YRKEDGSPVA MHGLCPHRYF
SLVKGRVEGD NIVCGYHGFT FADNGDCIDI PSQDTVPRNF CQPVYPIEER GPICWIWMGD
LDTCDTDLIP PYHDFGLDNP DTYYSSENYF HVKGRSQLLV DNLMDLTHLP YIHQQLGKGG
DTLKKIPMET QERSLSYRVL RNGKMPWNPF LEIVYGKDAK FEGLADFVHL SDFYGPELVK
TSLPTITKIP GKEDIPKELG HMAILHGLTP ETETSTHYFG FSTRNFRQGD TALDKFQFES
EMQVRQQDVD AIEDMEKRID AAALFQRELI VGADKAAIQA RRKVDGMLAA ENLEP
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