| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0850 |
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| Symbol | |
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| ID | 4173699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1002356 |
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| End bp | 1003549 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053853 |
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| Product | alcohol dehydrogenase GroES-like protein |
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| Protein accession | YP_660432 |
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| Protein GI | 109897177 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA CAAGTAATCG CGGTGTTGTA TACAAAGGCC CAGGCCAGGT GGCTATAGAA
AGTATTGCTT TTCCTGAGTT GGCGATTGGT AATCGAAAAT GTCAGCACGG CGTGATCCTA
GAAGTAGTAA CAACCAATAT TTGTGGCTCT GATCAGCATA TGGTTCGCGG GCGAACCACA
GCACCGTCAG GGTTAGTGTT AGGCCATGAA ATTACCGGTC GAGTCATCGA GGTGGGTCGA
GATGTAGAGT TTATTAAGCC AGGTGATTTG GTTTCAGTGC CATTCAATAT TGCCTGTGGT
CGCTGTCGCA ATTGTAAAGA GGGAAGAACG GGCATTTGCT TAAACGTAAA TCCTGCTCGA
CCTGGCGCCG CTTATGGCTA CGTTGATATG GGAGGCTGGG TCGGAGGGCA AACTGAATAT
GTTATGGTGC CCTATGCTGA TTTCAATTTG CTCAAGTTTC CTGATCCTGA ACAAGCCATA
GAAAAAATCC AAGACTTAAC CTTGTTATCT GACATTTTCC CAACTGGATT TCATGGATGC
GTAACGGCTG GGGTTGGTCC TGGGTCGACA GTTTACATTG CAGGAGCAGG ACCTGTTGGC
CTTGCTGCTG CCGCATCTGC TCAGTTGTTA GGCGCGGCAT GTGTCATAGT GGGCGACATG
ATTGAGGAGC GCCTCGCACA AGCTCGTAGC TTTGGCTGCG AGACGATCGA TCTAACCCAA
GAGGGTGATA TGGGGGATAG GATTGAAGCT ATCATCGGTG AGCGTGAAGT TGACGCGTTC
GTGGATTGTG TGGGCTTTGA AGCACACGCT TGTGGCCACA ATCACCATCA GGAATCCCCG
GCAACCGTAC TCAATTCAGC GATGAAAATG ACCCGGGCGG GAGGCCAAAT TGGTATTCCT
GGACTGTATG TTACAGAAGA CCCTGGTGCG GTAGATGATG CTGCGAAGCA GGGAGCGCTA
AGTATGCGTT TTGGTTTGGG ATGGGCGAAG TCTCATTCGT TTCATACCGG CCAATGCCCA
GTGATGAAAT ATCATCGGGC ACTAATGCAA TCGATTCTAT TCGATAAAGT AAAAATTGCT
AAAGCGGTAA ATGTGAAAAT GATCTCGTTA GATGATGCCC CCAAAGGATA TGCTGATTTT
GATGGTGGTG CTGCGATGAA GTTCGTCATC GACCCACACG GTAACGCAGC TTAA
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| Protein sequence | MNKTSNRGVV YKGPGQVAIE SIAFPELAIG NRKCQHGVIL EVVTTNICGS DQHMVRGRTT
APSGLVLGHE ITGRVIEVGR DVEFIKPGDL VSVPFNIACG RCRNCKEGRT GICLNVNPAR
PGAAYGYVDM GGWVGGQTEY VMVPYADFNL LKFPDPEQAI EKIQDLTLLS DIFPTGFHGC
VTAGVGPGST VYIAGAGPVG LAAAASAQLL GAACVIVGDM IEERLAQARS FGCETIDLTQ
EGDMGDRIEA IIGEREVDAF VDCVGFEAHA CGHNHHQESP ATVLNSAMKM TRAGGQIGIP
GLYVTEDPGA VDDAAKQGAL SMRFGLGWAK SHSFHTGQCP VMKYHRALMQ SILFDKVKIA
KAVNVKMISL DDAPKGYADF DGGAAMKFVI DPHGNAA
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