| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0825 |
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| Symbol | |
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| ID | 4172322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 964467 |
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| End bp | 966668 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053828 |
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| Product | Beta-glucosidase |
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| Protein accession | YP_660407 |
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| Protein GI | 109897152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000149252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTA GAAACACGGC AATCACATTG CTAGCTTTGT GTGTGGCATC TCCTACTTTG
GCTAACGACC ATCCTTGGTT TGATACTCAG CTCCCTACCA ATGAGCGCAT CGAGTCTTTG
ATAGACGCCA TGACCCTAAA AGAAAAAGCG TCGCAACTGG TTAACGGCAA CGTGGCCATT
GAACGCTTAG GTTTACCTGA GTACGATTTT TGGAATGAAG CATTACACGG CGTAGCCAGA
AACGGCAGAG CCACGGTTTT TCCTCAAGCC ATAGGAATGG CTGCCACCTT TGATCAGGAC
TTATTGTTAC AAGCCGCGAC GGTTATTTCA GATGAGGCAC GGGCAAAATT TAACGTTTCC
AGCGAAATAG GCAATCGCAG TAAATATTCT GGCTTAACCT TCTGGACTCC TAATATCAAC
ATCTTCAGAG ATCCCCGCTG GGGGCGAGGT CAAGAGACCT ACGGCGAAGA CCCATACCTA
ACAGCACAAA TGGGTAAGGC TATGGTGAAT GGTTTACAAG GTGACCACCC CAAGTATTTA
AAAACAGCAG CAGCGGCGAA GCATTTCGCA GTGCACTCAG GGCCAGAAGC GTTGCGCCAT
GAATTTGATG CCATCGCCTC AGAAAAAGAC ATGTACGAAA CTTATTTCCC CGCCTTTGAA
GCCTTGGTTA CAGAAGCTGA TGTTGAAACC GTTATGGCTG CGTATAACCG AGTGAACGGT
CATCCCGCGG GCGGTTCAGA TTTCTTGTTA AATACCGTGC TTAGAGATAA GTGGGGATTT
AGCGGGCATA TCGTGTCAGA TTGCTGGGGT TTAGCGGATT TTCACGAGTA TCACAAGGTC
ACTGCCAACG CTGTCGAGTC AGCTGCTTTA GCTATCAACA CAGGGACAGA TTTAAACTGT
GGTTCTGTTT ATACTGCCCT TCCCGATGCG GTGGAAGCAG GTTTAGTGGA CGAAAAGACC
ATAGACACGC GTTTGCATAA AGTCCTTGCC ACTAAATTCA AATTAGGCTT TTTTGACCCC
AAAGACGACA ACCCTTACAA CAGTATTTCT GCTGATGTGG TTAACTCTGA CGCACACGCC
GACGTTGCCT ACGAAATGGC GGTAAAATCT ATTGTGCTGC TACAGAATGA AAACCAGGTT
TTGCCTTTAG ACAAGAATAT TCGAAACGTG TATGTCACCG GTCCCTTTGC CAGTAGCAGC
GAAGTCTTAT TGGGGAATTA TTACGGCTTG AGTGGTAAAA CTACCAACAT TCTTGATGGC
ATAACCGCCA ACGTAAGCGT TGGCACCACC ATTAATTACA AACAAGGCAT TTTGCCCTAT
CAAGCGAACG TTAACCCCAT CGACTGGACA ACAGGGGAAG CCAAGCAAAT GGGAGACGTC
ATCATAGCGG TAATGGGCTT GTCTGGCGCT TATGAAGGTG AGGAAGGTGA AGCGATTGCC
TCTCCTCATA AAGGCGATAG GTTGTCTTTG GATTTACCAG AGCATCAAAT TGAATTTTTG
CGCAAATTAA GAAAAGACAA TGATAAGCCT GTTATTGTGG TATTAACCGC AGGCACCCCG
GTAAATGTCA CTGAAATAGC ACAACTCGCG GATGCTATTG TGTTTGCTTG GTACCCAGGC
CAAGAAGGCG GTAAAGCCGT GGCCGATATC CTGTTTGGTG AGCGCTCACC GTCGGGTCGC
CTTCCCATCA CCTTTCCCAA ATCAGAAGCC CAACTTCCTC CTTACGACGA CTACAGTATG
CAAGGGCGCA CCTATCGTTA CATGACTGAA GAACCCATGT ATCCATTTGG TTTCGGTTTA
AGTTACGCCA CGGTCAAATT TGATAATATT ACCCTTGGCA ACGCAGAGGC ACTCAGCAGC
ACGGATGGTC AAAAAGGCAC CTTGGATGTA TCGGTGAATG TCACTAACAC TGGTACTCGT
GAGTTGGAAG AGGTAGTACA ATTGTACTTG AAAACGCCCA ATGCCGGCAT AGATCAGCCA
ATCCAGTCGC TGAAAGGGTT TCAGCGGATC AAACTGGCGC CGGGGCAAAC TGGACAAGTC
TCATTTACTG TGTCGAAGAA ACAGTTGTAT TCCATAAACG CCAAAGGCAA ACCCGTGCTA
CTCGAGGGAG ATTACCACGT CATTGTAGGT AACGCGTCAC CGGGCAAGCG CAGCGAAACC
CTAGGGGCGG CTAAACCACA AATAGCCAAG TTCGTGTTGT AA
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| Protein sequence | MIIRNTAITL LALCVASPTL ANDHPWFDTQ LPTNERIESL IDAMTLKEKA SQLVNGNVAI
ERLGLPEYDF WNEALHGVAR NGRATVFPQA IGMAATFDQD LLLQAATVIS DEARAKFNVS
SEIGNRSKYS GLTFWTPNIN IFRDPRWGRG QETYGEDPYL TAQMGKAMVN GLQGDHPKYL
KTAAAAKHFA VHSGPEALRH EFDAIASEKD MYETYFPAFE ALVTEADVET VMAAYNRVNG
HPAGGSDFLL NTVLRDKWGF SGHIVSDCWG LADFHEYHKV TANAVESAAL AINTGTDLNC
GSVYTALPDA VEAGLVDEKT IDTRLHKVLA TKFKLGFFDP KDDNPYNSIS ADVVNSDAHA
DVAYEMAVKS IVLLQNENQV LPLDKNIRNV YVTGPFASSS EVLLGNYYGL SGKTTNILDG
ITANVSVGTT INYKQGILPY QANVNPIDWT TGEAKQMGDV IIAVMGLSGA YEGEEGEAIA
SPHKGDRLSL DLPEHQIEFL RKLRKDNDKP VIVVLTAGTP VNVTEIAQLA DAIVFAWYPG
QEGGKAVADI LFGERSPSGR LPITFPKSEA QLPPYDDYSM QGRTYRYMTE EPMYPFGFGL
SYATVKFDNI TLGNAEALSS TDGQKGTLDV SVNVTNTGTR ELEEVVQLYL KTPNAGIDQP
IQSLKGFQRI KLAPGQTGQV SFTVSKKQLY SINAKGKPVL LEGDYHVIVG NASPGKRSET
LGAAKPQIAK FVL
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