| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0824 |
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| Symbol | |
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| ID | 4172321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 962928 |
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| End bp | 964292 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053827 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_660406 |
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| Protein GI | 109897151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000871412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCTA ACAATAACGG GCCGCTATTA ACGGCCTTAG CGGCAGCGTT TTGCTTGGCT
GGCTGCCAGC AAGGCAATAG CGATATACCG GCGGCAGCGG CAAAAAGCCC TGTCCCGAGC
TTTTTACCCG ATGCACCTAA GGGCTTTGAA TGGCTGCCCA TTGACAGTAT GTCTGATGAA
TTTAACGCTG GGGAACTCGA TAGCACAAAA TGGCGAGACC ACATTACGAC GTGGCAGGGG
CGCCCTCCGG CCGAGTTTCT GACATCAAAC GTGAAAGTGG CGAACGGCAA TCTTGAGCTA
AAAACGTCGA CTCATCCTAA GCCGAATGAA ACCTATTCCA TGGGGGGCTC TGCGGTGTCT
GGCAAGACTC CTGCCACCTT CGGTTACTTC GAAGCGCGCA TCAAAGCGTC CAAAACCAAA
ATGTCGACAA CGTTTTGGTT GCACTCGGAT GAGTCTGATG ATCGGCACAA AGGATGCGGT
AAATACCACT CCACAGAATT GGATATTCTT GAAACGATTG GCGGCTGGCC AGAGGACAAC
TGGGCTAATG TGATGCGCTC AAACACGCAC TATAAACCGA GCGAAATGGT GGATGGTAAG
TGTAAAGGCG CGCCATACAT TTCAAAGGGC GTAAAATATG ACAGTCAAAA TAAGCTCTCG
GCAGACTTCA ACACCTACTC AATGTGGTGG GTAACGCCAA ATCAAATGCA CTTTTATTTT
AATGGCAATC GTACAGGCAC GGTTAATCTG GCTCATGAGC GCGACCAAGT GCCGTTCAAT
AGTGAAATGT CGCTGCGAAT GGTAGTCGAA ACATACGATT GGCAACCGCA ATGGATACCA
GAAGGGCATG CGCCTTATCC CAATGAGAGC GAGTTAGATG ACCCAAGTAT CAATACTGCT
TACTACGACC ACGTGCGCAG CTACCAGTTG CAATCATCAG CAGATAACCT AATTAATGAT
GCGGGTTTTG AATCATCGTC GCGGGCTGAC AGTTGGCAAT TAGCAGGAAA ACAAGCCACT
TTCTCTGATG AGCCTGACAT GAGTTACACC CAAGCTTGGG GCGTAAAGTT AGGGGCGCAA
AGTCATGCAC AGCAAACGGT GACGTTGGTT GATGAAGGGC AATATGAGAT TACCGTACAC
GCTAAAAATA TCAGCGATAG CGCTGATTCG GGTGGCAGGT TAAGCGTGCT AAGCGAACAA
GGTAAGGTGC TGGATTCTGT TGTGGTTTCA GGGAATGTCT TCTCACCTTA CACCTACAAT
TTTTCAGGCC ATAAAGGGCA GAAAATCACC TTGCGTCTGA GCGGTGCACA AGCGGGCATT
ACTGTGTTTG ATAATGTTGC AATGATGAAG GTTGAGGCCG AATGA
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| Protein sequence | MIANNNGPLL TALAAAFCLA GCQQGNSDIP AAAAKSPVPS FLPDAPKGFE WLPIDSMSDE
FNAGELDSTK WRDHITTWQG RPPAEFLTSN VKVANGNLEL KTSTHPKPNE TYSMGGSAVS
GKTPATFGYF EARIKASKTK MSTTFWLHSD ESDDRHKGCG KYHSTELDIL ETIGGWPEDN
WANVMRSNTH YKPSEMVDGK CKGAPYISKG VKYDSQNKLS ADFNTYSMWW VTPNQMHFYF
NGNRTGTVNL AHERDQVPFN SEMSLRMVVE TYDWQPQWIP EGHAPYPNES ELDDPSINTA
YYDHVRSYQL QSSADNLIND AGFESSSRAD SWQLAGKQAT FSDEPDMSYT QAWGVKLGAQ
SHAQQTVTLV DEGQYEITVH AKNISDSADS GGRLSVLSEQ GKVLDSVVVS GNVFSPYTYN
FSGHKGQKIT LRLSGAQAGI TVFDNVAMMK VEAE
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