Gene Patl_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0819 
Symbol 
ID4172316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp953886 
End bp955457 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content47% 
IMG OID638053822 
Productsulfatase 
Protein accessionYP_660401 
Protein GI109897146 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3119] Arylsulfatase A and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCA TCAATGGAAA AACGCTGCTC GTAAGTACTG CTTTTTTATT ACTATGCGGC 
TTAGGCATCA GTGGAAAAGC CTATACCCGA ACTCAAGTGC AGAGTGAAAG TGAAACAGTA
AAAAATAAAC CTAATATCGT TATTTTTTAT GTGGACGATC TCGGTTACAA CGATATTGGC
GCTAATGGCG GTACCCTGGT CAGTACACCA AATATCGACC AACTCGCCAG CAAGGGTATC
CGCTTCACTG ACGCCCATAG CTCGTCAGCG ACATGCACCC CTTCGCGCTA TTCCTTGCTC
ACAGGGGAAT ACGCTTTTAG AAACAACGCA GCCGTACTGC CAGGTGACGC GCCTCTTATC
ATTAACGTGA ATAAGTCAAC CTTGCCCGAT ATGCTCAGCA AGGCCGGCTA TACCAGTGCC
ATGGTAGGCA AATGGCACTT AGGGTTAGGT GACGGCGAGA GCCCAGTCGA TTGGAATCAA
GAAGTTAAAC CCGGCCCACG ACAGGTGGGC TTTGATTACA GCTTTATCCT GCCCTCAACC
GGTGATCGCG TACCGTCTGT ATACATGGAA AACGGCCGAG TGCAGAATTT AGATCCCATG
GACCCGCTAA AAATAAGTTA CGTGGAAAAG ATTGGTCAGC GTCCCACAGG ACGTGAAAAC
CCTGAATTAT TGCGCCAGCA AGCTGATAAT CAACACAGTG ATACCATTAT CAATGGCATC
AGCCGGATCG GGTTTATGCA AGGGGGGAAA TCCGCTGAAT GGAAAGACGA AGAGTTCTAC
CAAGTCTTCA CGAATAAAGC CAATCACTTC ATCGAACAAA ACGCGAAAAA GCCGTTTTTC
TTGTTTTTCT CATTTCATGA TATTCACGTA CCACGTTTGC CTAACGAGCG CTTTTTAGGA
AAAAGCCCTT TGGGTATTCG CGGTGATGCC ATTATGCAAA TGGACTGGAT TACCGGACAG
GTCGTAGCCA AACTAAAAGC AATCAACGCC CTAGACAACA CGCTTATTAT TTTTACCAGT
GACAACGGGC CTGTGTTGAA TGACGGCTAT CAAGACGGTG CTGACAACAC CTTAAATCAG
CATCAGCCTG GGGGTCTATA TCGTGGTGGT AAATACAGCG CTTACGAAGC CGGCACGCGA
GTTCCTACCA TTGTGCATTA CCCAGCGAAA GTGCAAGCTG GGGTGAGCGA TGCTCTGGTC
AGTCAAATTG ATATTTACGC CTCTTTAGCA TCTATGCTCA ATATCGAATT AGATGACAAA
GAAGCCATTG ATAGCGAAGA TTATCTAGCA ACATGGTTAA ACAGTGACGC AGCAGGCAGA
ACTGAGTTGA TTGAAGAGTC ATACACGTTG GCACTTCGTA CCGGTGACTG GAAATTCATT
GCCCCCACAG ATAAAACCAA CCCTTGGATT GCCAGTGATA AACGCATTGA GTCAGGCATG
TCCCCTACCC CGCAATTATT TAACCTGAAG GACGATCCAC AAGAGCAACA TAACGTGTTT
AACACGCACC CGGACAAAGT CACCCAATAT AGCCAACGCA TTGCAGATTT GGTTAAACGC
GAAACGCGCT AA
 
Protein sequence
MSAINGKTLL VSTAFLLLCG LGISGKAYTR TQVQSESETV KNKPNIVIFY VDDLGYNDIG 
ANGGTLVSTP NIDQLASKGI RFTDAHSSSA TCTPSRYSLL TGEYAFRNNA AVLPGDAPLI
INVNKSTLPD MLSKAGYTSA MVGKWHLGLG DGESPVDWNQ EVKPGPRQVG FDYSFILPST
GDRVPSVYME NGRVQNLDPM DPLKISYVEK IGQRPTGREN PELLRQQADN QHSDTIINGI
SRIGFMQGGK SAEWKDEEFY QVFTNKANHF IEQNAKKPFF LFFSFHDIHV PRLPNERFLG
KSPLGIRGDA IMQMDWITGQ VVAKLKAINA LDNTLIIFTS DNGPVLNDGY QDGADNTLNQ
HQPGGLYRGG KYSAYEAGTR VPTIVHYPAK VQAGVSDALV SQIDIYASLA SMLNIELDDK
EAIDSEDYLA TWLNSDAAGR TELIEESYTL ALRTGDWKFI APTDKTNPWI ASDKRIESGM
SPTPQLFNLK DDPQEQHNVF NTHPDKVTQY SQRIADLVKR ETR