Gene Patl_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0815 
Symbol 
ID4172312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp946823 
End bp950047 
Gene Length3225 bp 
Protein Length1074 aa 
Translation table11 
GC content48% 
IMG OID638053818 
Producthypothetical protein 
Protein accessionYP_660397 
Protein GI109897142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC ATTTCCCCCT TATCACTACT GTTATTGTTG GTTTGCCCAT GGCAATGCTC 
GTCGCGGGTT GCAACGACGA TGCAAGCGAT GTGGCATTTA AAGAGCCACT GCCTGATGTG
GTCGATTTTA ACTACCATGT TAAGCCGATC CTGTCAGATA CATGCTATTT ATGTCACGGC
CCGGATGTAG CCAACGCCAA AGCGGGCTTA AGCCTGTCTA ATTTTGACAG TGCCACCAGC
CACAAGACCG ATGACGGACT GGCCGCCTTA GTCGCAGGTT CAGCCAAAAA CAGTGCTGCC
TATCGTCGTA TCATGTCTGA TGATGAAAAC ATGGTTATGC CACCACCTGA GTCAAATCTA
TCGCTGTCTC CCCGGGAAAA AGCGCTCATC GGAAAATGGA TAGATCAAGG TGCAAAATAC
AAAAAGCACT GGTCTTTTAT TGCCCCAGAA AAAACAACCT TGCCGACACC CGCCAACTCA
GACTGGGCGG CAAACCCAGT GGATAATTTC ATACTGAAAG CCATCGAGGA TAAAGGCTTA
ACGGTCAGTC CTCGTGCTGA CAAAGAAACA CTGATACGCC GAGTCACCTT CGATCTTACT
GGCCTGCCCC CTACTTTAGA GGAAATCGAT GCGTTTCTTG CTGACACCAA CCCTGATGCC
TATCAGCAAG TGGTAAAGCG GTTACTTGCC ACCCCTGCAT TTGGTGAACG CTTAGCAACA
GAGTGGCTAG ATGTTGCGCG CTACGCTGAT ACCCATGGAT ACAGCACAGA CTTTTACCGA
GACATGTCTC CCTATCGTGA TTGGGTCATT CAAGCATTTA ACCAAAACAT GCCATTCGAT
GAATTTGTTA CCTGGCAGCT TGCCGGCGAC TTGCTACCTG ACCCAACAAA AGAGCAAGTG
CTCGCCACGG CCTTCAACCG TATACATGCA CAAAATGGCG AGGGCGGGAT CGTTAACGAA
GAATTCAGAG TGGAGTACGT GAAAGATCGG GTGCAAACCG TAGGCACAGG CTTACTGGGT
TTGACCATGC ACTGCGCCCA ATGTCACGAC CATAAATACG ACCCTATATC TGCCAAAGAG
TATTACGCCA CGACAGCATT TTTTAACAAT ATCGAAGAGT CAGGGCAAAT ATCCTACGAT
GCCAACGATA TGCCTGTCCC CACATTGCTA TTGCCTACTG ACACGCAACA AGCGCAGCTT
GAACGCATCA CGACACAAAT GAATGCCCTA ACCCAGCAGA TGGACTCTCG CCACAGCGTC
GACAACAACG CCTTCAAACA GTGGGTAAAC AGTAATATAT CCTCTGACGC CCGAGACATT
AACCAAACCC TGCAGGCCTA CTTTCCTTTG TCTTCCTCTG ATAGTAACGA CAACATCAGC
AACCAGATCA ACAAAGATGC CCCCGGGAAG GTTATCTTTG GCTCTGACCC GAAAAAGAAA
GTGGGCGATG CGATGGTGCA TATAAAAGAC GATGGCCGAG AAGCAATCGT CCTAAATGGC
GACGATCCTC TTTACTTTCC GACCGTAAAC GGCTTCGAGC GCGCGAAACG CTTTAGCATT
AGCTTAGATA CCAAAGTGCC TGACTCGTTA GAAGAAGGGG TCCTGTTTCA TTACAACAAA
GCCGGTATTC TTTATAATTT TAAAGGCTTT GATGTTTCAA TACAGGACGG ACGCTGGCTG
GTGCGTTTTG CCCATACTTA CCCATTTAAC GCCATTACAT TAACCTCAAC CGAAGAGGTA
ACACGCAATC GGTGGCAAAA TATCACTCTG ACCTACGACG GCTCTTCAAA AGCCGCTGGT
GTACATTTTT ATATCGACGG CCAACCACTA AAAATGCAGG TTGAGAAAGA CAATCTATAC
AAAGATTTCA AACACACACA TGAAGGCGTG CTCAAAGAAA TGGGCTTAAA AATTGGGGCC
AGATGGCGTA GTCGAGGCAC ACCTGACACC CTAGTTGATA ACCTGCGAGT TTACAGCGCT
GACTTGACAC ATGTTGAAGT CGCTAACGCG TTTGGCACTC AAAACCGTGA ATCTGACTTT
GCCCAGCAAG ATTTATTGGC CCTATACAAT CACAGGTACA ACAGTGCATT TCAGCAAGAC
ATTGCTCACC TATCCGAATT ACGGGCCGAG CACAGTGGTT TAGCTGAGCA GATTCAAGAA
ATTATGGTCA TGAAAGAAGG TCCTAGTCCG AAGCAAGCCT ACGTACTGAA TCGTGGCAGC
TATGCAGAGC ACGGGGAGCC AGTAGAACCC GGTGTCCCTG AGACGGTCCT AACGTTTGAT
AAAAGTTTAC CTAAAAATCG TTTGGGCTTA GCCAAGTGGC TAACGGATGC TAAAAATCCA
CTGGTGTCTC GGGTTGTGGT TAACCGCTAT TGGCAGATGA TTTATGGCCA AGGTTTGGTG
ACCACACCAG AGGACTTTGG CAGTCAAGGC AAGCTGCCGT CACACCCAGA ATTACTCGAC
TGGCTTGCAG TGGAATTCAT TGAATCTGGG TGGAACGTTA AGCAGCTCAT CGCGTTGATG
GTCAACTCAT CGACTTACAC TCAATCATCC AAGGGCTCCC CTGAGCTAAA AGAGCTAGAC
CCAGAGAATA CGCTACTGGC TCGCGGCCCA AGTGCTCGTT TAACAGCTGA AATGATCCGT
GATAATGCAC TGGCCAGTAG CGGTTTATTA GTCGAGCAGG TGGGCGGGAA AAGCGTACAC
CCTTATCAGC CTAATGGTAT TTGGCGAATG AACAACATGG ATTACGTGCA AGGCTCTGGG
CAAGATTTGT ATCGCCGCTC CATGTACACC ATATACAAGC GCAGCGTTCC GCCACCCAAT
ATGACCGCCT TTGATGCTCC GTCCCGGGCG CACAGTGTGG GGGTTAGGCA AGCAACCAGC
ACCCCATTAC AAGCGCTGGC ACTGTTAAAC GATCCGCAAA TTGTTGAGGC ATCTCGTGTG
TTAGCACAAA GCGTGTTAAG CGACACCGCA AATACCGAAG AACAACTCAA GAAAGTATAT
CGTTTACTGA CCAGTCGTAT GCCAAGCGAA CAAGAGCAGG CTCTGATCCT AGAAATGTAT
AGCGAGATCG AGCAAAGCTT TAGCCAAACA CCTGACAAGG CAGCCGAATT TCTATCTGTG
GGTGAAACCC CTGCCAATAG TGAGCTTAAT GAAATTAAGC TGGCTGCATT GGGCACAGTG
ACCAATATGT TAATTAACCA CGACGCTAGC GTCATTAAAC GTTAG
 
Protein sequence
MKIHFPLITT VIVGLPMAML VAGCNDDASD VAFKEPLPDV VDFNYHVKPI LSDTCYLCHG 
PDVANAKAGL SLSNFDSATS HKTDDGLAAL VAGSAKNSAA YRRIMSDDEN MVMPPPESNL
SLSPREKALI GKWIDQGAKY KKHWSFIAPE KTTLPTPANS DWAANPVDNF ILKAIEDKGL
TVSPRADKET LIRRVTFDLT GLPPTLEEID AFLADTNPDA YQQVVKRLLA TPAFGERLAT
EWLDVARYAD THGYSTDFYR DMSPYRDWVI QAFNQNMPFD EFVTWQLAGD LLPDPTKEQV
LATAFNRIHA QNGEGGIVNE EFRVEYVKDR VQTVGTGLLG LTMHCAQCHD HKYDPISAKE
YYATTAFFNN IEESGQISYD ANDMPVPTLL LPTDTQQAQL ERITTQMNAL TQQMDSRHSV
DNNAFKQWVN SNISSDARDI NQTLQAYFPL SSSDSNDNIS NQINKDAPGK VIFGSDPKKK
VGDAMVHIKD DGREAIVLNG DDPLYFPTVN GFERAKRFSI SLDTKVPDSL EEGVLFHYNK
AGILYNFKGF DVSIQDGRWL VRFAHTYPFN AITLTSTEEV TRNRWQNITL TYDGSSKAAG
VHFYIDGQPL KMQVEKDNLY KDFKHTHEGV LKEMGLKIGA RWRSRGTPDT LVDNLRVYSA
DLTHVEVANA FGTQNRESDF AQQDLLALYN HRYNSAFQQD IAHLSELRAE HSGLAEQIQE
IMVMKEGPSP KQAYVLNRGS YAEHGEPVEP GVPETVLTFD KSLPKNRLGL AKWLTDAKNP
LVSRVVVNRY WQMIYGQGLV TTPEDFGSQG KLPSHPELLD WLAVEFIESG WNVKQLIALM
VNSSTYTQSS KGSPELKELD PENTLLARGP SARLTAEMIR DNALASSGLL VEQVGGKSVH
PYQPNGIWRM NNMDYVQGSG QDLYRRSMYT IYKRSVPPPN MTAFDAPSRA HSVGVRQATS
TPLQALALLN DPQIVEASRV LAQSVLSDTA NTEEQLKKVY RLLTSRMPSE QEQALILEMY
SEIEQSFSQT PDKAAEFLSV GETPANSELN EIKLAALGTV TNMLINHDAS VIKR