| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0805 |
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| Symbol | |
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| ID | 4173118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 931959 |
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| End bp | 932846 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053808 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_660387 |
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| Protein GI | 109897132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.841126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAA TATTAAAAGC GACAATGAAG GCGATGGTCA GCGGGTTGTC TTTGACATTG
TGTACCGTGA GTGACGCACA GGAGTTAACT GTGCCGCCCC CTGGATACAC GGCCATTATC
CAAAAAAGCG ATTTAGTGCA GCGGCAAAAC CAGCAGTTCC CTTTGTCGGA TCAAAACAAC
AAGGGCAAGT GGGTTTTAAA TTCACAGTTT ACTGATGAAT TCGATGGCCA AATATTGGAT
ACCCAACGTT GGCACCCAAC TAACCCTGGT TGGAAAGGGC GAGAGCCGAC CTTTTTTCAC
AAAGACAATA CTCGCTTAGA AGGCGGCGAG CTGGTTATGT CTATTAATCA ACATGGAGAT
ACCGAATTAC CTGAAGGATA TACACATTCA TCAGGGTTTA TTAAAACCAA AGAGCGTGTG
CTTTATGGCT ATTTTGAGTC AGAAGCAAAG TTAATGGATG CCCCTTGGGT ATCTGGGTTC
TGGTTGACCA TGGGCACCAA AGAGTGGTGG ACAGAAATTG ACATTCAAGA GAATTGCCCC
TGTGTTGATG GCCAGCGTCA CGATATCAAC AGTAACCTGC ATGTGTTTCG CTCGCCTAAG
GAGCATGGGA ATGTCAAAAA ACATTTCTCT GATTCAAAGA AATACTATCA CCCAGATGAG
ATTCAAAAGG ACTATCACGT TTGGGGGCTA GAATGGAACG AAGACGTGAT CCGCTTTTTT
ATTGACGGTT TTATGTTTCG AGAAGTTGAA AATACCCATT GGCACCAGCC GCTGACAATT
AACGTTAATA ATGAATCAAA CAAATGGTTT AACGCCTTAC CAGATGATAA TCGTACGGAT
GAAGAATATA GAGTTAAATA CGTGCGCGTG TGGCAACAGC GTCAGTAA
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| Protein sequence | MKLILKATMK AMVSGLSLTL CTVSDAQELT VPPPGYTAII QKSDLVQRQN QQFPLSDQNN
KGKWVLNSQF TDEFDGQILD TQRWHPTNPG WKGREPTFFH KDNTRLEGGE LVMSINQHGD
TELPEGYTHS SGFIKTKERV LYGYFESEAK LMDAPWVSGF WLTMGTKEWW TEIDIQENCP
CVDGQRHDIN SNLHVFRSPK EHGNVKKHFS DSKKYYHPDE IQKDYHVWGL EWNEDVIRFF
IDGFMFREVE NTHWHQPLTI NVNNESNKWF NALPDDNRTD EEYRVKYVRV WQQRQ
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