Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0795 |
Symbol | |
ID | 4173108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 915921 |
End bp | 917570 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053798 |
Product | sulfatase |
Protein accession | YP_660377 |
Protein GI | 109897122 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0245615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTAA AATTAAAAGT GCTACTCACG TTGGCAACTG TTTTTGCGCT CGGGGGATGT GTATCGGCTG AGTCTTCTTC CACTAACTCG ACGACTTCTA GCGCTTCCAG TACAAGCAAC GAAACCCAGC AATACAATAT TCTATACATC ATGACGGATG ATCATGCGGC TCACGCAGTA GGCGCATATC AGGGGCGCTT AGCTGAACTT AACCCCACTC CAAATCTAGA TGCCTTGGCA AATGAAGGCA TGACCTTTAC CAACGTATTC GTGACTAATT CGATTTGCAC ACCGAGCCGT GCAACGATAT TAACCGGTCA ATACAGTCAA ACGAACGGCG TACTCGATCT CAGGGGGAAA ATCGCGACAT CCCAGCAGCA CTTACCGCGA TTAATGAAAG AGGCGGGCTA CGAGACTGCC ATCATTGGAA AGTGGCATTT AAAAGCAGAA CCAGGTGCAT TTGATTACTA TCAGGTACTT GAGTCTCAAG GCACGTACTT TGACCCTGAG TTTAGAACAA GAGGCCCCAA GCCTTGGCCT GAAAACGAAA CGCAATACAC TGGGCATTCT TCAGATGTTG TAACTGATTT ATCGATCGAA TGGTTAGAAA ACCGAGTGGC CAATAAGCCG TTTTTCTTGA TGCATCAATT TAAAGCCCCT CACGATATGT TTAAGTACGC GCCGCGCTAT GAAGACTTCC TCGCTGCTGA AACTATCCCT GAGCCAGATG ATTTATACGC TGTAGCCAAA ACATTCGGTT CTATTGCGAC AAGAGGTAAA AACGATACCC TAAGAGCCGA TATTGGCACC TCAGTGTCAC GCAGAAACAA TCGGCGAAGC ATGGGAATAG ACTTAGGCGT TGACCCAAAT TTAAGTGAAG AAGAATTTAC CCGCCAAGCG TATCAAAAAT ATTTGAAGGC ATATCTTCGC TGCGTAAAAG GAGTTGACGA TAACGTAGCG CGGTTAATTC AGACTCTCAG AGATACCGGC CAATACAAGA ACACCATCAT TATATATACG TCTGACCAAG GCATGATGCT CGGTGAGCAT GACTTACAAG ATAAACGTTG GATATTTGAT GAATCTATCA GAATGCCGCT TATTGTTAAG CATCCTGATG CCAGTGAAAC GGGCATACAA AGCGACTTGT TGATTAACAA CACTGACTTC GCCCCTTTTA TTTTAGACCT TGCGAATATC AGCACCCCAA AATATATGCA CGGAAAAAGC TTTAAAACAG CGTTATTTTC ACAACCCCCC GAACAATGGC GCACGGCGAG TTACTATCGC TACTGGACTC ACAGAGCGTA TCACGACGTA CCCGCCCACT TTGGCGTGAG AAGTAAAGAG TATAAATTGG TTTTTTACTA TGGGACGAAC CACATGGACT CCCCCTACCC GTTTTACGAT AAAGCATGGC TGAATAAAAC AGGACGTTCG AACAATACCA TCGACACACC CGTTGCATGG GAACTATACG ACCTGAAGAA CGATCCTTCA GAACAAAATA ATGTTTATTA CGATCCCCGT TATAGCAGCG TGATAGCTTC TCTGAAGTCA GAGTTACAAG AACAAAGAGC CATGTACGGC GAAACAGACG CTAAATACCC GCACATACAG AGAATTATCG ACAGACATTG GAACGATTAG
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Protein sequence | MTLKLKVLLT LATVFALGGC VSAESSSTNS TTSSASSTSN ETQQYNILYI MTDDHAAHAV GAYQGRLAEL NPTPNLDALA NEGMTFTNVF VTNSICTPSR ATILTGQYSQ TNGVLDLRGK IATSQQHLPR LMKEAGYETA IIGKWHLKAE PGAFDYYQVL ESQGTYFDPE FRTRGPKPWP ENETQYTGHS SDVVTDLSIE WLENRVANKP FFLMHQFKAP HDMFKYAPRY EDFLAAETIP EPDDLYAVAK TFGSIATRGK NDTLRADIGT SVSRRNNRRS MGIDLGVDPN LSEEEFTRQA YQKYLKAYLR CVKGVDDNVA RLIQTLRDTG QYKNTIIIYT SDQGMMLGEH DLQDKRWIFD ESIRMPLIVK HPDASETGIQ SDLLINNTDF APFILDLANI STPKYMHGKS FKTALFSQPP EQWRTASYYR YWTHRAYHDV PAHFGVRSKE YKLVFYYGTN HMDSPYPFYD KAWLNKTGRS NNTIDTPVAW ELYDLKNDPS EQNNVYYDPR YSSVIASLKS ELQEQRAMYG ETDAKYPHIQ RIIDRHWND
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