Gene Patl_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0782 
Symbol 
ID4174116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp899207 
End bp899818 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content45% 
IMG OID638053784 
Producthypothetical protein 
Protein accessionYP_660364 
Protein GI109897109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.131885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAC GTCAGCATCT TTTACCTCGC AAGCTTCTTG ATATTGTTCG TCACAAAGAT 
TTTGTGATAA TCACGCTTTT CATTGTGGCC GTGACGCTTT TTAACGTGAC TGGCAATATG 
GCCTTAGCAT CAACCGAAAT ACATGAGCAT AAAGCGCGGG ATATTGGCAG AACCACGCCC 
GTTCCGAAAA TCCAGCTGAG CGCATTTCGC GATCCCATTG ACGGGGTGAA TATTCACCTG 
GAAGTGGACA ATTACCTACT GAACGTCCCT GATTTAGCAA CGATAACTGC TGACGATAAA 
GTCGACGGCG TGCTACAAGG CCATGCCCAT GTTTTCGTAA ACGGGATTAA ACGCCAAAGG 
CTGTACGGTA AAGATGTGCA CATACCGCAA TCTTGGCTGA AAGAGGGCGT TAACCAAGTT 
GCGGTATCTT TAAATAGTCA TAAGCATGAG AACTGGATGT CTGGGGATCA CAATATCGTC 
AGTTCGGTTT TTCTCGATTT ATCTAAGCAA AACATAGTCT TGCACTATTT TACCTCACAG 
CCCATAAAAG CCACCTCACA GCCTAAAGAA TCGAACGCTG AGCAGATTAA AAGCCAACAT 
GCCCACCATT AG
 
Protein sequence
MSIRQHLLPR KLLDIVRHKD FVIITLFIVA VTLFNVTGNM ALASTEIHEH KARDIGRTTP 
VPKIQLSAFR DPIDGVNIHL EVDNYLLNVP DLATITADDK VDGVLQGHAH VFVNGIKRQR 
LYGKDVHIPQ SWLKEGVNQV AVSLNSHKHE NWMSGDHNIV SSVFLDLSKQ NIVLHYFTSQ 
PIKATSQPKE SNAEQIKSQH AHH