| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0773 |
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| Symbol | |
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| ID | 4174107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 884901 |
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| End bp | 885614 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053775 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_660355 |
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| Protein GI | 109897100 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACA GCCTGAGTAT CCGTGCTTAC ACCAAGCAAC TTCAAAGCCA TGTACACCAC
AACCACCATC AGCTGGTGCT GCCCGTTCAG GGCAGCATAG TGATTGATAT GGTCAGCTAC
ACAGGCAAAG TGACCGTGGG GGAATGTGTG GTTGTGCCTA GTGGCACAGA ACATGGTTTC
AAAGCGGATG AAGCTGCACG TTTTATGGTG GCCGACTTAG CCACATTACC CGCCCACTTA
CTTGAAAGCG GACTGGCTGT ATTTTCTATT TCCCCGCCTT TGATGAGTTT TTTATTGTTT
GTTGAAAAAC AATTACAGCA CCAGATCGAT AGCGGTATTG AGCATTCTAT TCTCGATGTT
TTTAGTATGT TGCTGAGTCA GCAACGGGCA ATGCATACCC TTGATAAACA AATGCGTATA
GTACAAGGCT GGATCAATGA ACATCTTGAA CAGCCTATGA GCATTGATAC GCTATCCGCG
CTGGCTTGCT TAAGCCCAAC GCAATTCAAA AAGCGCTTTA AAGCCAGCTT TTCCATGAGT
GCTCAGCAGT ACATTACTGG ACTTCGAATG GAAAAGGCCA AAGCCTTGTT AGCGCATACT
GACTTGCCAG TGCAGCTTGT GGCTGAAAAA GTGGGCTATG GCGACCTTTC GGCCTTTAGT
CGGCGTTTCT CTGTGTACAC TGGGTTATCG CCTCGGGCAT TTGCACAAAC CTAA
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| Protein sequence | MNNSLSIRAY TKQLQSHVHH NHHQLVLPVQ GSIVIDMVSY TGKVTVGECV VVPSGTEHGF
KADEAARFMV ADLATLPAHL LESGLAVFSI SPPLMSFLLF VEKQLQHQID SGIEHSILDV
FSMLLSQQRA MHTLDKQMRI VQGWINEHLE QPMSIDTLSA LACLSPTQFK KRFKASFSMS
AQQYITGLRM EKAKALLAHT DLPVQLVAEK VGYGDLSAFS RRFSVYTGLS PRAFAQT
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