| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0770 |
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| Symbol | |
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| ID | 4173948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 882028 |
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| End bp | 883005 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053772 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_660352 |
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| Protein GI | 109897097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCT TTCTATTTTT TGTCTTAGGG GTTTTTACAT CCGTTGATGT ATTTGCCTCA
CCACAAACGC TATTTTGGGG GCACGTCTAC GAGGTTAGCG AGCCCTTGCA TAAACAGGCC
GTGTGGGCCG CTGAGCAAAT AAAACTGCGC ACTAAAGGGC GCTACGACAT TCAGGTCTTC
CCAGTGTCTA TGCTGGGTAA AGAAGCGGCG CTTAATGAAA GCCTACGTTT AGGCAGTGTC
GACATTATTT ATACTGGAAC CAGTTTTGTT GCTCAGCTAT TTCCCCCTTT TGCCCTAACC
GATTTACCTT ATATCTATGC TAGCTATGAA CATTGGCAAC GCTTCAACGA AAGTGATTTG
TTTGATGAGC TGGCCAAAGG CTATGCAGAC ATCACGCAGG GCAATCAAAT TCTGGCCAAT
AACTATTACG GCGCAAGACA CGTGACGTCT CACGCGGCCG TGCTTGGCCT AACTGACAGC
AAAAACTTGA AAATACGCGT GCCCAACGCG GCTATTTTTA AAATGTTCCC TACGGCCATA
GGCGCCAACC CAACACCAAT TGCATTTTCT GAGGTGTATA TGGCACTGCA ACAGGGTGTG
GTTGATGCAC AAGAGAATCC CCTACCAACG ATAAAGGCCA AAAAGCTGTA CGAAGTGCAG
CCACATATTA GTCTCACTGG GCATATGTTG GGCTCAAATT TAAGCATTAT TAGTCAACGT
AGATGGGCAA TGCTAAGCGC AGAAGATAAA GATATTTTTA GTACGGTATT AAGACAAGCC
GCTGCCCGTG TATCTGATGA AACCCGCACC ATCGAACTTG AGTTGGTGGC ATGGTTTGAG
ACCCAAGGGA TACAGGTTCA TCAAATTGAT ACGCATGCCT TTCGCCAAGC TACCTTGGCC
CTTCATGAGC CCTATTTGCC TATCGTAGGG CGAGAAAATT ATCAACGTTT GTTGCAGCTA
AATAGTGAAG GTAAATGA
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| Protein sequence | MRSFLFFVLG VFTSVDVFAS PQTLFWGHVY EVSEPLHKQA VWAAEQIKLR TKGRYDIQVF
PVSMLGKEAA LNESLRLGSV DIIYTGTSFV AQLFPPFALT DLPYIYASYE HWQRFNESDL
FDELAKGYAD ITQGNQILAN NYYGARHVTS HAAVLGLTDS KNLKIRVPNA AIFKMFPTAI
GANPTPIAFS EVYMALQQGV VDAQENPLPT IKAKKLYEVQ PHISLTGHML GSNLSIISQR
RWAMLSAEDK DIFSTVLRQA AARVSDETRT IELELVAWFE TQGIQVHQID THAFRQATLA
LHEPYLPIVG RENYQRLLQL NSEGK
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