| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0765 |
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| Symbol | |
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| ID | 4173943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 870665 |
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| End bp | 872470 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638053767 |
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| Product | histidine kinase |
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| Protein accession | YP_660347 |
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| Protein GI | 109897092 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCT CCACGATGCA AATCCCGAGT ATTTCACTGC CAATTTTCAC CATTGGTAGT
GCTGAGATTC AATTAACTGA ATTGAGTGGA TGGCGAGAAC TTGTACATAT AAATAATTTA
CGAGGAATGA AAAAACAGTT TCGGCATGAC AAGCCTGCTC TCATAGTGGC CTGTATCGCT
AGCGCTGAAG ATGAGCAATT GAGCGAACAA GTGACACAGT TTGTAAGACA AGGGTTAATG
AATAATGATA CCCGCATAAT ATTGCTTCAT CAGCCAGAAT ACGATTTAGA TCAGGTCAGC
TGGTTGGGTA CCATGCAAGT CAATGGTTGC TTACTGGCAG AGCAAAGTAA GCGAGCATTT
AACCTTTCTA TTCTTAATCG AGAAATTGAT ACCTTCATAC ATATTGAAAA CAATCGTCGA
CAACACGATG CTGAAACAAA CATGCTTATG TGCATAAGTC AGTTTTCACG AAGTTCGGAA
TCCGTAGCCG AATTATTAAA AGTTTTCTCG TCGACGCTTT CCGCTTTATG TTACTCGTCA
TGTTGTTTAC ACATCAAAAT ACTTGAGCAT GATAGGGGCA GCATCGAATA CTGTGATGCT
GAAAACCCCG CTGTAATAGA TGCTTTTAAT CGTGCGCTAC ATTTACCCGT ACTACCGGGT
TTTTTGAATA AAACACTCGA TGAAAAACAA CCCCAGATCA ATTTGATACC CGAAGAGATC
GAACTAGCCG AAGTAGAAGA AAAACTCAGT GTCTCAATAG GCAGCTACCT AACATTTCCG
ATTGTTGCTT ACAGTAAGGC ACTTTATTTA TTAATGTTTT TTGTTTCGGA TGAGCAGATG
GATAAAGTGT CCATGAAGCA AATTAACGTG ATCAACAAAG CATCTGAACA ATTGACCTTA
TTATTAGAAA GACGGCAAGC AGAGCATAGT TTAAAGCGTC AGTATAAGCG TCTTAAGGAG
ACACTTGTTG ATCTAAAAAC GGCTAAACAA GAATTACAGC ATAAGGAAAA GATGGCCAGT
ATTGGCCAAA TGGCAGCGGG TATTGCGCAT GAAATTAATA ACCCTTTGGC CTATGTGATG
ACGAATTTTT CATGCATGGA TGATTACCTA AAAAGTATTA TGCAGCTGCA ATCGCTGCAG
TCAGAGTTTT TAGCATCGAT CGACATAGGG CGAGATCATA AAATTACCGA GTTGAGAAAT
AATATCGCTA AATTTGAACA AGACGAAGGT ATGGAATTTA TTCTAGAGGA TATCCGTAGT
GTGATATCAG AATCTCATAG TGGACTTAAA CGGGTGAAAG ACATTATCAC AGATCTAAAA
TCCTTCACTT ATAGTCAGTC TAGTGAATTA GAAGTATGCG ATTTAACCCA AGTTCTCGAT
GATACATTGA AAGTCTTGTC TTACGACTTA AACGGAAAAA TCACAGTTGA AAAAGACCTA
GTAGACCTTC CCAGTTTCAT GGCTCACAAT GGGTTGATGC AACAAGTCTT TACGAATTTG
ATTAAAAACG CAGCCCAAGC GCTGACGCAA ACACAGGTTC AAAACCCGAA GATCTGTATC
AAAACGAAGC GCTGTGAAGA CGTTATACAG ATAAGCGTTA AAGATAATGG CCCCGGAATT
CCTATTGAGG CGCAGGAGAA AATCTTTGAG CCGTTCTACA CCACAAAATC GGTCGGAGAA
GGCACAGGCT TGGGCTTATC AGTGACGTTT AATATCATCA AAAAATTAGC TGGCACTATC
TCGATTAATA GCGAGCTTAA TCAATTCACC GAATTTACGA TGCTATTTCC CGTCGCCAAA
GAATAA
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| Protein sequence | MESSTMQIPS ISLPIFTIGS AEIQLTELSG WRELVHINNL RGMKKQFRHD KPALIVACIA
SAEDEQLSEQ VTQFVRQGLM NNDTRIILLH QPEYDLDQVS WLGTMQVNGC LLAEQSKRAF
NLSILNREID TFIHIENNRR QHDAETNMLM CISQFSRSSE SVAELLKVFS STLSALCYSS
CCLHIKILEH DRGSIEYCDA ENPAVIDAFN RALHLPVLPG FLNKTLDEKQ PQINLIPEEI
ELAEVEEKLS VSIGSYLTFP IVAYSKALYL LMFFVSDEQM DKVSMKQINV INKASEQLTL
LLERRQAEHS LKRQYKRLKE TLVDLKTAKQ ELQHKEKMAS IGQMAAGIAH EINNPLAYVM
TNFSCMDDYL KSIMQLQSLQ SEFLASIDIG RDHKITELRN NIAKFEQDEG MEFILEDIRS
VISESHSGLK RVKDIITDLK SFTYSQSSEL EVCDLTQVLD DTLKVLSYDL NGKITVEKDL
VDLPSFMAHN GLMQQVFTNL IKNAAQALTQ TQVQNPKICI KTKRCEDVIQ ISVKDNGPGI
PIEAQEKIFE PFYTTKSVGE GTGLGLSVTF NIIKKLAGTI SINSELNQFT EFTMLFPVAK
E
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