Gene Patl_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0749 
Symbol 
ID4173100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp854375 
End bp854626 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content46% 
IMG OID638053751 
Productmembrane protein 
Protein accessionYP_660331 
Protein GI109897076 
COG category[S] Function unknown 
COG ID[COG3205] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.90984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TCACCTTTGC TATTACTCAC TTTACCGTTG CGTTCAGCGT AGCGTATCTT 
CTTACGGGTA GTTTTATCGT AGGTGGGCTT ATTGCGTTAG TAGAGCCTGC GGTTAACACG
GTGGCGTATA TGATCCACGA GCGTATTTGG GAGAATAAAC GGCTTCGCAG TCAGCGCAGT
GGGAAGATGG CAAAGAAGTC TTCTACACCA ATGACTATTT CACACTTCGG GCACACACAC
CAATTAGGCT AG
 
Protein sequence
MKTITFAITH FTVAFSVAYL LTGSFIVGGL IALVEPAVNT VAYMIHERIW ENKRLRSQRS 
GKMAKKSSTP MTISHFGHTH QLG