| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0745 |
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| Symbol | |
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| ID | 4173096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 849274 |
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| End bp | 850827 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053747 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_660327 |
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| Protein GI | 109897072 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG AAAAAGTAAC CGAGATGCCA TCGCTGCGTC AGAAGATTGG CTTTGTTGCT
GTGATGCTCG GTATGTTTAT GGCGATTTTA GATATTCAGA TTGTCGCCAG CTCTTTGAAT
GAAATTCAAG CAGGGGTGTC TGCCACACCT GATGAAATTT CTTGGGTGCA AACGGCCTAT
CTCATCGCCG AAATAATTAT GATCCCGCTG TCAGGCATGT TAACCCGTTG GTTATCAACG
CATCTTACCT TCGTGATTTC CTGTGTGGCA TTTACTATCG CCAGTGTCGG CTGCGCCCTT
GCGCAAACTA TTGACCAATT AATTATTATG CGCGCCATTC AAGGCTTTGT GGGCGGGGCG
ATGATCCCCA TAGCCTATGC CATTAGCTTC AAGTTATTCC CGCTTAGGGT CATGGGAGCA
GTGCAAGCGG TGATCGGCAT GATAGCGACA ACCGCTCCTT CAATTGGCCC TACTTTAGGC
GGTTACATCA CTCAGCACGC AAGCTGGCAT TGGTTATTTT TAATGAATGT GGCGCCGGGA
ATATTGGCCA GCGCGGGTGT GTGGTTTTAC TTACGTATCG ATAAACCAGA TTTTTTATTG
TTCAAAAAAA TCGATTTTTT AGGCCTTCTT TATTTGGCGT TATTCTTAGG CCCGCTTGAA
TACATACTCG AAGAAGGCCC TGGGGATGAG TGGTTCGATA GCACGCTGAT CTTAATGCTC
AGTGCGGTAT GCGCAATGGG CGCGGTAGGT TTTTTCTGGC GGGCCTTTCG CGTAACGCTA
CCCATCGTTG ACTTGCGCGT GTTTGGCGAC CGTAACTTCG CATTAGGTGC TTCATTAGGC
TTTATTATCG GAATTGCTCT GTACGGCATG GTGTATCTAA TGCCGTTGTT TTTAGGCACG
GTGCGGGGGT TTAATAGTTT TCAAATTGGC CAGCTGATGT TTGTGACAGG GGCATCAATG
TTCTTTAGTG CCCCCATTAT TGGTCGGCTA TCTGACAAAG TTGATGCGCG TTATATGTTA
GCGGTTGGCT TAGTAATGGT GGGCACGGGC TCTGTGATGA ATGCGAACCT TACGGATCAA
GCAGATTTTA ACCAGTTTAT GTGGCCGCAA ATGGTGCGCG GGGTGGGCTT ATTGATGTGT
TTATTAACGG CCTCTCGTAT TGCCATGGGC ACCTTGCCAA ACAGTGAGAT CAGTAACGCA
GCGGGTCTAT TCAACGTGTT GCGTAATTTA GGCGGTGCAG TGGGCCTAGC CTTTATGGAT
ACTATACGTG ATATTCGCGT GGACTATCAT TGGGCGCAGC TTATTCCTGC TATCGACACC
AACCGCGCTG TGGTGCTCGA AGAGCTTACT AAAGCTCAGT TAGCTGTCGC TGGCGCATCG
AGCGATCCTG CTGTTGCAGC GATTAAGCAA ATTGCGGATA GAGTCATGGT GCAAGCGCAA
GTACTGGCCT TTAATGATCT ATTTCTATGG ATTGGCGCTA TGTATGCCTG TGCCTTGCCG
TTGATGTTTT TTATTCGTAA GGCCAAGAAC GAAGATACTG GCTCAGCGCA TTGA
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| Protein sequence | MSDEKVTEMP SLRQKIGFVA VMLGMFMAIL DIQIVASSLN EIQAGVSATP DEISWVQTAY
LIAEIIMIPL SGMLTRWLST HLTFVISCVA FTIASVGCAL AQTIDQLIIM RAIQGFVGGA
MIPIAYAISF KLFPLRVMGA VQAVIGMIAT TAPSIGPTLG GYITQHASWH WLFLMNVAPG
ILASAGVWFY LRIDKPDFLL FKKIDFLGLL YLALFLGPLE YILEEGPGDE WFDSTLILML
SAVCAMGAVG FFWRAFRVTL PIVDLRVFGD RNFALGASLG FIIGIALYGM VYLMPLFLGT
VRGFNSFQIG QLMFVTGASM FFSAPIIGRL SDKVDARYML AVGLVMVGTG SVMNANLTDQ
ADFNQFMWPQ MVRGVGLLMC LLTASRIAMG TLPNSEISNA AGLFNVLRNL GGAVGLAFMD
TIRDIRVDYH WAQLIPAIDT NRAVVLEELT KAQLAVAGAS SDPAVAAIKQ IADRVMVQAQ
VLAFNDLFLW IGAMYACALP LMFFIRKAKN EDTGSAH
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