| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0744 |
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| Symbol | |
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| ID | 4173095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 848078 |
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| End bp | 849169 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053746 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_660326 |
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| Protein GI | 109897071 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTTAA GAAAAGGTTT TTTCCTCGTC GTTTTAGTGT TGGTCGTGGG GTGGATAGCA
ACTAAAGGCT ACGAGTGGTA CGAACATGGG CGATTTATTG AAGAAACCGA TAACGCGTAT
ATCAAATCAG ACAATATCTC CATTCGAGCT GAAATATCCG GGCGTATCGA AACCTTAGCC
GTGCAAGAAA ATCAACATGT GCGCCAAGGG CAACTTCTGG TCAAAATTAA CGCCAGTGAT
TACCAAGCAA AATTAGCACA GGCTAACGCT GAGCTTAGCG TTGCCGAAGC CGCCCTTGTT
AATGCTCAGC AGCAAATTAG TCTGCAAGAT AAAAAAATAG ATGAAGCAAA AGCCAATATT
GATGCGGCCA AAGCAGAAGT AAAGCGCGGC GAGCTCAATT TAGCTCGCTT CCAAGTTTTA
GATAAACAGT CTTTCGACTC CAAGCAGCAG CTGCAAAATA CCGAAGCTGA CGTGGCGGTT
GCCAAAGCTA AGCAAGCCCA AGCTGAAGCG GCTTACGCTG CTGCACAACA GATGTTTGCT
GTGCTCGATG CACAAAAGCA AAGTGCTGCA GCCAACATCA GTTCCGCTGA ATCACAGATT
GCTTATGCGC AAAGCCAGCT GGCTAAAACA GATATTCTGG CACCAAGCGA TGGCATAGTC
GGTAATTTAG GAGCTCGCAC TGGGGGCTTG GTTCAACCGA CCATGACACT CTTGTATTTG
GTACCGCTTC CTCAAGTGTA TGTTGTGGCC AATTACAAAG AAACGCAGAT AGGCCACATG
ACAATCGGCC AGCCTGTAAA GCTCACAGTA GATGCTCAAG ATGATGTGGA GTTTACCGGG
GTGGTAGCGT CTATTTCACC AGCCACCGGC TCTGAATTTA GTTTACTGCC TAAAGATAAT
GCCACTGGAA ATTTCAATAA AATCGTACAA CGTGTGCCTG TTCGAATTCA CGTCACAGGT
CCAAGCGAGT ATTTGCATTT ATTGCGTCCT GGTTTATCTG TGGTACCGCA TGTTGATACA
CAAGGTTTCA ATCAACAAAG TGCCTATTTG CCCAACGAAG AAGTGCTGAC CACGCAACGC
GATAGGCATT AA
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| Protein sequence | MWLRKGFFLV VLVLVVGWIA TKGYEWYEHG RFIEETDNAY IKSDNISIRA EISGRIETLA
VQENQHVRQG QLLVKINASD YQAKLAQANA ELSVAEAALV NAQQQISLQD KKIDEAKANI
DAAKAEVKRG ELNLARFQVL DKQSFDSKQQ LQNTEADVAV AKAKQAQAEA AYAAAQQMFA
VLDAQKQSAA ANISSAESQI AYAQSQLAKT DILAPSDGIV GNLGARTGGL VQPTMTLLYL
VPLPQVYVVA NYKETQIGHM TIGQPVKLTV DAQDDVEFTG VVASISPATG SEFSLLPKDN
ATGNFNKIVQ RVPVRIHVTG PSEYLHLLRP GLSVVPHVDT QGFNQQSAYL PNEEVLTTQR
DRH
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