Gene Patl_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0743 
Symbol 
ID4173094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp847294 
End bp847944 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID638053745 
ProductTetR family transcriptional regulator 
Protein accessionYP_660325 
Protein GI109897070 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCCAA AGACACCACT AGCTAGCAAC ACCACTGAGT ATGCACCACG AGAACGTGGC 
CTTATTCGCC GTGATAAAAT TATTCAAGCC GCGACGCGTG TTTTCGTTCA ATCTGGTTTT 
GAATCAGCGA ATCTGCAAGA TATCGTTGCT TTAGCTGGCG GCTCACTAGC CACCCTTTAC 
CGATTATTTG GCAACAAAGA GGGGTTATTT TATGCCGTTA TCGAGCGTAA GAGTGACCAG 
CTACTGGGCG AAATTGACTA TGGTGATTTA CAGCACAAAA CTCCAAAAGA TGCATTGCAG 
GTGATAGGCA TGCGTTTTTT CAGTATGGTG ATTTCGCCGG AGGTGGGCGC GATACACCGC 
TTGCTGATAG GCGAAGCGGT GCGCACTCCC AAACTGCGTG AAATATTCTT AACACTTGCT 
ACCGAGCGCG CAATACGTAA CTTAGCGGAT TACCTGCAAA CCCAAGTTGA TAAACAAACA 
TTGGATATTC CAGATTGCTT TATTGCCGCC AGTCACTTTA TGGGCGCATT AAAAGGCAAC 
TATCACATTC GATGCATGTT AGGGGAAGTG GTCAACTTAC CCCTTGAAGA GCAAGAAAAA 
TTTGTAACCG CAGCAGTTGA TATGTTCCTC GGTGGTTATG CTCGTCGCTA A
 
Protein sequence
MPPKTPLASN TTEYAPRERG LIRRDKIIQA ATRVFVQSGF ESANLQDIVA LAGGSLATLY 
RLFGNKEGLF YAVIERKSDQ LLGEIDYGDL QHKTPKDALQ VIGMRFFSMV ISPEVGAIHR 
LLIGEAVRTP KLREIFLTLA TERAIRNLAD YLQTQVDKQT LDIPDCFIAA SHFMGALKGN 
YHIRCMLGEV VNLPLEEQEK FVTAAVDMFL GGYARR