Gene Patl_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0736 
Symbol 
ID4173087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp837355 
End bp837951 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content39% 
IMG OID638053738 
ProductTetR family transcriptional regulator 
Protein accessionYP_660318 
Protein GI109897063 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTAT CGGACAAGAA ACGTTTAAAC ATTTTAGATG CAGCTGAACA ATTGTTCTTT 
GAAAATGGTG TAGAACACAC CACTATGGAC CAAATCGCCA AAGCTGCTCA GGCTTCTAAG 
CGTACCGTAT ACAACCACTT TGTGACCAAA GATGCGCTAT TTGAGGCGAT TATTAGCCGA 
ATGGTTGAGC ACCTTAATCA AGATGAGGAG TTGAGCTTTA GCAACAAAGT AGCGATTGAT 
ATTCAACTGA CCAAAATCGC ACAACAAGAA GTGTCACTGC TTAACTCCGA ACACTTTTTA 
CGTATAGCCA AAATAGCCTT TATGCAAATG TTACAACAGC CGACGTTAGC CGAGCATATC 
GCCAGTAATC AATTTGGTTG TATGCGTTAC CTTGAGTCTT TCTTGCGCCA AGGGGTAGCT 
AACAATAAAC TGCAAATAGA AAATATAGAA TTTGCGGCTA AACAATTCGT TTATCAGCTA 
AAGTCATTTG TGTTTTATCC GGTTTTGTTT GGCTTTGAAA CCCCTAATTC CCTGCCGCTA 
AAAAAGATTA TTGAACAAAC TGTTGCGACG TTTTTATCTC GCTATCAGGT AAAGTAA
 
Protein sequence
MKLSDKKRLN ILDAAEQLFF ENGVEHTTMD QIAKAAQASK RTVYNHFVTK DALFEAIISR 
MVEHLNQDEE LSFSNKVAID IQLTKIAQQE VSLLNSEHFL RIAKIAFMQM LQQPTLAEHI 
ASNQFGCMRY LESFLRQGVA NNKLQIENIE FAAKQFVYQL KSFVFYPVLF GFETPNSLPL 
KKIIEQTVAT FLSRYQVK