Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0733 |
Symbol | |
ID | 4173084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 833783 |
End bp | 835168 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638053735 |
Product | hypothetical protein |
Protein accession | YP_660315 |
Protein GI | 109897060 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.987867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGAA TCCTCGCATA CAAAAGTGAC TCGTTCTCGG AAATTAATTT CACAAAGAGT GAATCATCAA AGAACTTCAA AACGTTATTG ATTGGAGAGA ATGGAACAGG GAAAACTCGC TTATTAAATG AGCTGATATC AGCCGTTAGA TCTCATCACC CATCCGAGAG TTCTAGCAGG ACCAAAAAAT TTAATTACGA GCTAGCTTAT TTGAATGAGA GCAATAAAAA AATTTTACTA AACTCAAATA AAGCACAAGA AAAAACAGCC ATAATAAGTA ATAAAGTTAT TGCTATCTCC GCTTCTAATA ATGATAAGTT ACCTTTCTCT GATAGTGACA AATTTTTTGA TAAGAACTAT CAATATTGTG GCATAAGAGA AACAAGCAAT GCATCTTGGA CTAGCTCCTT AATGAGAAAG ACAATCGAAA ACCTACTTGA TTGTGTTTCT AATAACAAGA TAAAGCCTCT TTCAAAAATT TTTAGTTTTC TTTCGTTTGA AAATATTATA CGTATTAGGT TCAGTCTTAA AAAAACAACA AAGCTTGATT TGTTTAACTG CAAAGCAGAA GATTTGCTAG AATTTATTGA ACACTATTCA CTGAATTCCA GAAGAATGCA GGTGGACTTG ATTCGTGAAT TTGATTTAAA AGCAGCCAGA AATATTCTAA GTTATTTTAA AGATATCATT CTACGGGTAT CTGATAAAGA AGCATATTTT GAGGTAAACC TATTGGATGA TAACTACGGG TTTCTCAAAG CATATCAAAA TATTGATCTC TTAAGGCGAG TCGGTTTGAT TAGTGATGTA TCTTTAAGAT TAGCAAAAGA GGGTGATAAA CAAGACTTCA CTTTTATGGA TGCAAGTTCA GGAGAAAGTC AACTGTTACA CAGTCTTTCA TCTTTTGTAA GGTATGTTGT CGATGACTCT TTAGTTGTAA TTGACGAGCC TGAAATAAGC CTACATCCCA ACTGGCAACT AAAATATATT TCATTAATAG ATTTGCTTTT AACCGATTTG AAAGGGTGTC ATGTAGTCAT AGCTACACAT TCTCATTTTT TAGTTACTGA TTTAAAGCCT GAAGATAGTT CATTGATAGT TTTAGAAAAA GATGAAAAGG GCATTAGAGC TACTCCTATC GAAAGTTCAA CTTTAGGGTG GAGTCCTGAA AGTGTTTTAT ACAGAGTTTT CAATGTGAGG ATAATTAACA GTGTCTATTT AGATAGTGAT TTACAAAAAG CACATCAATT AATGTCAAGT GATGATATAG ACTTTGTAGA ATTAAAAAAG CTAATGAGTA AATTTGAGTC ACTGGTTTTA GATGAAAAAG ATCCATTGAA AAAGTTCATT GGTGCTATGG AGGATTTTAT TGATGAGCGT GGATGA
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Protein sequence | MFRILAYKSD SFSEINFTKS ESSKNFKTLL IGENGTGKTR LLNELISAVR SHHPSESSSR TKKFNYELAY LNESNKKILL NSNKAQEKTA IISNKVIAIS ASNNDKLPFS DSDKFFDKNY QYCGIRETSN ASWTSSLMRK TIENLLDCVS NNKIKPLSKI FSFLSFENII RIRFSLKKTT KLDLFNCKAE DLLEFIEHYS LNSRRMQVDL IREFDLKAAR NILSYFKDII LRVSDKEAYF EVNLLDDNYG FLKAYQNIDL LRRVGLISDV SLRLAKEGDK QDFTFMDASS GESQLLHSLS SFVRYVVDDS LVVIDEPEIS LHPNWQLKYI SLIDLLLTDL KGCHVVIATH SHFLVTDLKP EDSSLIVLEK DEKGIRATPI ESSTLGWSPE SVLYRVFNVR IINSVYLDSD LQKAHQLMSS DDIDFVELKK LMSKFESLVL DEKDPLKKFI GAMEDFIDER G
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