| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0730 |
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| Symbol | |
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| ID | 4172187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 828671 |
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| End bp | 829588 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053732 |
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| Product | phage integrase |
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| Protein accession | YP_660312 |
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| Protein GI | 109897057 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAG CGAGTCCACT CGCCCTGTAT TTAGGGAGAC TTGCGCCTAA TAGTCGGCGC
TCAATCAAGT CACAGCTATA CAAAGTTGCT GAGATAATGG AATGGCCACC GGATAAACGC
GACGAGATGC TCCACCAAGT TGATTATCAA ACTGCATGCC AAATCAAAGT AGAGCTTATT
CAACACGGTT CATCTTCCAA ATCAGTTAAT CGTGCCATGT CGGCCATTCG TAACGTGGTT
AAGGTCGGTG TCATCATGGG CCTAGTGCCT GAAAATCAGC TAATTCAGCT CAGTGCTATT
AAACTTGAAA AGACCTCACA GCATCAGGGT AATCCACTCA ATGCAACGCA GGTAAATACA
TTGTTTAGCT ACTTAAACAA ACACACCAGC ATCATCGATG TCCGTAATCA GGCTATATTC
GCCCTATTAC TAGGTGCAGG CCTGCGCAGA AGTGAACTAA CTGCTCTGCA CTTGAAGGAT
TTAATCTTAC ACGAACGCCA ACTTGTCGTG CAAAAAGGAA AAGGCAATAA ACGCCGGACG
GCCTTCTTAC CTAAATGGTG TGTCGAGCAT GTTTATTCAT GGTTGTTGCT CCGAGGGGAT
AATGCAGGCT ACTTATTCAA TCCCGTGAAC AAAACCAATC GCATCAATAT TAATCGAGGC
ATAACCACCG AGAGCGTTTA CTTATTGGTA CGTAATACGG CAAAGCAGGT AGGACTTGGT
AACGTATCCC CCCATGACTT GCGCCGCACC TATATCACCC GCCTATTAGA GCAGAACATC
GATTTAAATA CCGTTCGCCT AATGGCAGGA CACCAAGATA TCAGTACCAC CGTGGTGTAC
GACAAACGCG ATAACAAGGT GATGCAAAAA GCTGCATCTT CACTGAGCTA TGGTGATACC
AGAGAGGCCA ATTCATGA
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| Protein sequence | MTTASPLALY LGRLAPNSRR SIKSQLYKVA EIMEWPPDKR DEMLHQVDYQ TACQIKVELI
QHGSSSKSVN RAMSAIRNVV KVGVIMGLVP ENQLIQLSAI KLEKTSQHQG NPLNATQVNT
LFSYLNKHTS IIDVRNQAIF ALLLGAGLRR SELTALHLKD LILHERQLVV QKGKGNKRRT
AFLPKWCVEH VYSWLLLRGD NAGYLFNPVN KTNRININRG ITTESVYLLV RNTAKQVGLG
NVSPHDLRRT YITRLLEQNI DLNTVRLMAG HQDISTTVVY DKRDNKVMQK AASSLSYGDT
REANS
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