| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0729 |
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| Symbol | |
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| ID | 4172186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 826668 |
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| End bp | 828674 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053731 |
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| Product | AAA ATPase, central region |
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| Protein accession | YP_660311 |
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| Protein GI | 109897056 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.562949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGCC CTCAACACAC TGCTCTAGCT GCTCGCTATG CAAGCGCCCT TCTCACTTAT
GGTCTAACTG AGCCTGAATA TGAAGCTCTG GATACGGATG TTTTGGACAA GCTAACAATT
CTGATTGGTC CAAATCAAAA GCCGTCATCG TTTGTAGAGA TGCAGGCCGC TTTGCAAAGT
ATGGCTAAGA ATGTACGAAA CGATATCATT TACCACAATG CTAGATTGCT TTGTGCGATC
TACCGAGTCC CGATAGAAAG CGCTGGGCTC ATTGAGTACA TCATCGCGCT GAGTTCATCG
AGTGTGTTAA AGGAATTGGT TGATGAATTA CAGTTTTGCG ACTTAATAGA TAGCGTAAAG
CGAGCTTTAA CGGCGCATTT TAAAGTTGAT GAAGATACCT GTTACTCACA ACTAGACGCT
TTAGCCAGCA ACGGCCTTAT TCGCTCGACC ACGCTAACGA ACTCTTGTGA CCTGATATTA
CCTGAAAGTC AGGTGCGGTT ATTAACGCGT AGCAAGCTAT CAAGTGCAGA GGTGTATTTA
CGTCATTTGT TATCGGCAAG TCCATCAGCG GCTTTCACCT TGAAAGACTT CTCGCACTTA
GATACCGAAA CGCTACATCA GTATTTACAG AGCGCAGTAA GGCAACGGTT AAGCGGAGTC
AATATCCTCA TCTACGGTGA TGCGGGTACA GGAAAGACCG AACTAGCCAG AGCCTTAGCC
AAGTCATTAT CGATAACCCT ATATGAAACG AAGACAATGG ACAGCGCGGG TAAAGGATTA
GAAGAGCGCT ACGACGTTAG GAGTCAAAGT CGCCTTCGTA TGCAGTACTT ATCTTCAATG
CAGGCACTAT TAGGCAGTCA CACCCAATCG ATGTTTTTGA TTGACGAATG TGAATCCATC
TTTATGGATA GCGATGAATA CTTTGCAAAA GATACCCTTC ATCGTCTACT GGAAACGAAT
CCTAATCCCT GTATTTGGAT AACAAACCAT ATTCAATACA TCGAAAATAG CTTCATTCGG
CGTTTTAAGC TGGTACAAGA AGTGAACGCC ATAGAGGGAA AATACATAGA GCCACTGGCG
AAACAGGCAT TTAGTGGGTT ACGTATCAAG CAACCCTATA TCGATAAGCT ACTTACTACA
GCCAATATCA CTCCTGCGCA TATAGGGAAT GCGGCACACG TAGCTAAAAC CATCAATCTA
ACAGGCCAGT CAGCACAAGA AGTAGTTTCT GAGGTGATTC AAAGTACCTT ATCAGCTTCT
GATTTATTAG CCACACCACT TAGCTATAAA CCAGAGATGG CGTTTGATGC TAGCTTGCTG
AACATCAAGC AAGGCAAGGA AACCATTAAG CAAATTAATG CTGCGCTCGC ACAACATGCG
CCAATTCGTA TATTACTGTC TGGCGAGCCT GGCACGGGTA AAACAGCCTT TGCGCACCAC
TTGGCGAAGC AGCATGACTT TAACCTTGTA TCAGTGCGCT GCTCTGACGT TTTAAGCAAG
TATATTGGTG AAAGTGAGTC CAACATTGCC AATATATTTT ATGACGCACA GCAGCACGGC
AACGCGTTAT TACTAGATGA AGTGGATAGC TTATTAGTAT CTCGCGAGCG CGTCACTGAG
CAACATAACA TACAGCTTAT CAATGAGTTA TTAACACAAA TTGAATGTTT TGAGCAGCCA
GTATTTGCCG CGACCAATTA CGCACGGTTA TTGGATAAAG CAGTACTAAG GCGTTTTGAC
TTTAAACTTG AAGCACAGTA CCTAACTGCC CAGCAATCTA TGACATTGTT TAAGCGAGTG
TTATCACTTA GACAATTAAC CCAATACGAA CAACAAAAGC TATCCATACT GACCCAATTA
ACTCCAGGTG ACTTCGCTAT TGTAGCGCGT CGCATGCGGT TTCAGCCCGA TGGTGATTTT
CGCCAGCAAG CATTGTCTCT GCTTATCGAA GAGAGCCGTC ACAAACAACC CAACCACCCT
ATCGGTTTCA TCTCGAAATC ACACTAA
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| Protein sequence | MSRPQHTALA ARYASALLTY GLTEPEYEAL DTDVLDKLTI LIGPNQKPSS FVEMQAALQS
MAKNVRNDII YHNARLLCAI YRVPIESAGL IEYIIALSSS SVLKELVDEL QFCDLIDSVK
RALTAHFKVD EDTCYSQLDA LASNGLIRST TLTNSCDLIL PESQVRLLTR SKLSSAEVYL
RHLLSASPSA AFTLKDFSHL DTETLHQYLQ SAVRQRLSGV NILIYGDAGT GKTELARALA
KSLSITLYET KTMDSAGKGL EERYDVRSQS RLRMQYLSSM QALLGSHTQS MFLIDECESI
FMDSDEYFAK DTLHRLLETN PNPCIWITNH IQYIENSFIR RFKLVQEVNA IEGKYIEPLA
KQAFSGLRIK QPYIDKLLTT ANITPAHIGN AAHVAKTINL TGQSAQEVVS EVIQSTLSAS
DLLATPLSYK PEMAFDASLL NIKQGKETIK QINAALAQHA PIRILLSGEP GTGKTAFAHH
LAKQHDFNLV SVRCSDVLSK YIGESESNIA NIFYDAQQHG NALLLDEVDS LLVSRERVTE
QHNIQLINEL LTQIECFEQP VFAATNYARL LDKAVLRRFD FKLEAQYLTA QQSMTLFKRV
LSLRQLTQYE QQKLSILTQL TPGDFAIVAR RMRFQPDGDF RQQALSLLIE ESRHKQPNHP
IGFISKSH
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