| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0727 |
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| Symbol | |
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| ID | 4172184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 824348 |
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| End bp | 825466 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638053729 |
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| Product | DNA-cytosine methyltransferase |
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| Protein accession | YP_660309 |
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| Protein GI | 109897054 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00617337 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCCTA AAAAGCTATT TTCGTTTTTT TCTGGAAGTG GATTTTTGGA TCTTGGCTTC
GAAAAAAACG GTTTCGACGT GGTTTACGTA AACGAATATC ATCAACCATT TTTGGATGCG
TACGAATATT CACGTCAACA AATGAAAATT GAAACTCCTC AGTATGGTTA TGACAACACT
AGCATTGAAG ATATCGCAAA TAACAGCAGT TTGTTAAATA AATTAGCTAG AAATGTTAAG
CAACAAAAGA AAGAAGGACA TATCACCGGA TTTATCGGAG GTCCGCCCTG CCCTGATTTT
TCGGTGGGCG GGAAGAATAA GGGGAAAGAG GGAGAGAATG GTAAACTAAC AAAAACGTAT
TGCGATATCG TTTGCGAGGC CAAACCCGAT TTCTTTATAT TCGAGAACGT TAAGGGGCTT
TGGCGTACAG CTCGCCATAG AGAGTTTTAT GAAGAAATCA AATTGCATTA TGAAAAGGCT
GGTTACCTTC TAAGTGACAG GCTCACTAAC AGCTTGGAGT TTGGAGCGCC ACAAGATAGA
GATAGAATTA TTCTATTTGG ATTTCATAAA TCACTTTTAA AAAACACTGA ATTAAAATCT
GGTGAAAACT TAACTGAAGC GCTTAAATGG GAAAAACACA TAAAGTACAA ACTGGATGTA
ACTTTAAATT ATCCTTGGCC AGTAAGAAGT CCGTTCAAAG AAAAAGTAAA AGTTTCAGCT
CCAAAAAACA TTCCTATTGA GCTGACCGTT GAGCACTGGT TTAAACAGAA TAATGTCACT
AAACACCCAA ATGCCAATCA TCATTTTATC CCAAGAGCTG CACTGCCAAA ATTTCAGTCA
ATCGACGAAG GAGACGCATC TAAAAAATCG TTTAAAAGAC TCCATCGATG GCGTTATTCT
CCAACAGCGG CGTACGGCAA TAACGAGGTT CATATTCATC CATATTTACC TAGGCGGATA
AGCGCAGCTG AAGCATTAGC AATCCAATCT CTGCCACAAG AATTTGAACT CCCGTCAACA
ATGACTCTTA GCAATATGTT CAAGACCATT GGCAATGGAG TACCATTCTT AATGGCAGCA
GGAATAGCAA AAATTCTAAG GGATTTCTTA GATAATTAG
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| Protein sequence | MMPKKLFSFF SGSGFLDLGF EKNGFDVVYV NEYHQPFLDA YEYSRQQMKI ETPQYGYDNT
SIEDIANNSS LLNKLARNVK QQKKEGHITG FIGGPPCPDF SVGGKNKGKE GENGKLTKTY
CDIVCEAKPD FFIFENVKGL WRTARHREFY EEIKLHYEKA GYLLSDRLTN SLEFGAPQDR
DRIILFGFHK SLLKNTELKS GENLTEALKW EKHIKYKLDV TLNYPWPVRS PFKEKVKVSA
PKNIPIELTV EHWFKQNNVT KHPNANHHFI PRAALPKFQS IDEGDASKKS FKRLHRWRYS
PTAAYGNNEV HIHPYLPRRI SAAEALAIQS LPQEFELPST MTLSNMFKTI GNGVPFLMAA
GIAKILRDFL DN
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