Gene Patl_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0726 
Symbol 
ID4172183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp823247 
End bp824323 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content39% 
IMG OID638053728 
ProductType II site-specific deoxyribonuclease 
Protein accessionYP_660308 
Protein GI109897053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000123282 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAA CCGCTACAAA TATCGCAGCA GCGATAAATT CCTTGGATAA AAATGTCACA 
TATGATTATC CAAACCCAAG AACCAAAACA AAGATCAATA TTGTTAATGT AGTAATGCCC
GAAGGACCGA TTATTTTTCG GAGATGTGAG CCGAATAAGG GAGAATCTTT TGATAACAAA
GCTGATGAAA GTATTTCTGT TGCCGCAATA TGGAGATTAG CCAGCTCCTT GAAGCCAAAT
CTTCCCGTGA ATGTCGATAG AGTCTTTGGT GCGAGCTATA ATTCTAGATC TGCACTTGAA
GCCATGCTGG TTCACACCGA AAATTACTAT ATCTGCTATC CCGGTCGCCT CGAGAAAATC
GGAGAAGATA CTAGAGTGAG AAATGGACAC AAACATATTA TTTTTTGTCC AGATAAGCCA
CACCGGAGAG GTATCTTCGA AGTTATGGAA GTCAATGACA TGGTTGTCTC AGAAGTCGAT
CGAGAGGTAT ATTTTGACTC TCTCTTATTA TCTGAAAATC CAGAAAGAGA TAAGGTTCAG
ATTGAAATAG ATAGACGCCA TGCTCAAATA CAAATAATGC TAATTAAAGC AGCTGAATCA
ATTGGATTGA AATCTTGGGT TGCAAAGAAT GATCATAGCA TAAAATATGA TTCGAAAAGA
CTGATTGAAA TGGATTCTGT TATTAAGGAT TTGAGTAATA CTGCCGCATT GCAAGGTTAC
CCGAATGCAG CTAGAGCTGG TGAACTAATT GATTTAATGT GGCTCGACAG TGAAGGTAGG
AAAATTCCAG CAATTATCGA GATAGAGCAC AGTACAGGAG TAACATCAGG ATTAACTCGA
ATGAAAGGTT TCATGGAGGA GGCTCCCGAT TTAGCACATA TGACCTTTAT TATATCTGCG
CCAGATGAGA TCAGAGAGCA AGTTTTGCGT AAAGCTAATG CTCCCCAATT CAAAGATATG
AATATAATGT TCCTGCCATA CTCAGCTGTC GAAGATTTGT TCCTGTTGAG TAGGAGAAAT
TTGAAAGGCA TCGATAACAT CAAATTTCTC CACACCTTTC TCGAGGCTGT GACTTAA
 
Protein sequence
MNVTATNIAA AINSLDKNVT YDYPNPRTKT KINIVNVVMP EGPIIFRRCE PNKGESFDNK 
ADESISVAAI WRLASSLKPN LPVNVDRVFG ASYNSRSALE AMLVHTENYY ICYPGRLEKI
GEDTRVRNGH KHIIFCPDKP HRRGIFEVME VNDMVVSEVD REVYFDSLLL SENPERDKVQ
IEIDRRHAQI QIMLIKAAES IGLKSWVAKN DHSIKYDSKR LIEMDSVIKD LSNTAALQGY
PNAARAGELI DLMWLDSEGR KIPAIIEIEH STGVTSGLTR MKGFMEEAPD LAHMTFIISA
PDEIREQVLR KANAPQFKDM NIMFLPYSAV EDLFLLSRRN LKGIDNIKFL HTFLEAVT