| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0725 |
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| Symbol | |
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| ID | 4172182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 821162 |
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| End bp | 823021 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638053727 |
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| Product | phage integrase |
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| Protein accession | YP_660307 |
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| Protein GI | 109897052 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0011564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCG TCAAAAAGCT CAAATATTTA TCCATTCGCG ATAAAAACTA TTACTTCAGA
TTTAACTTCC CTCGTAAGCT TCTAAGAGCA GATATTCGAC TTTCGCTTAA CACCCAGAAC
TTAGTGTATG CTCTTCAACG TATCGAGCTA TTGAAACCGT TCACAGATGA GTTAAAGATG
TTGGCGACCG CATCAAAGGG CTTAAATCTA TCTAGTCTTC AGCAACGAAT CATCGGGGTT
AAGGAAAACA TGCGGAAAAA ACTAACACTA CATGATATCG ATACCGTTAT AGGTGAGTCC
GAACGGAACG TAAGTAACCA TATACACATG ATGGATGTGT TGAGTGATGT TACTGTGAAA
GAGCTGTCCA GTGAGACTCT TAAGCTACTT GCTGACGTAA TGCTTACTGA TGATTTCGAG
TTAATGCAGC GAAAGGTCGT TTCGTATGCA AGCATGAGCG ACTCATTTCA AAGAGGACTA
AGCTTAGTAG CAAAATTCGC TGTACTACGA GCTACAGCTG GTAGCGAGCT CGAAGGTTCA
GCGATCAATA GCGCAAATGG ACAAGGACTT GAAGACATTT CTAGGATGAT AAGATACAAC
GATATCCCCG AAGTAGGCTC CGTCGATACA ACGGAAAATT TGCGTGAGAA AGAAACCGAA
TCTTTGTTGC GAGAACTTGG CTACGAATAT CAGACAGGTT CAATTGCTTT TAAAGTGCTA
AATAAGAAGC TAGCTAATTC AAGATACCTC AAGAACAACA TTGCCCTCGC TATTATTAAT
AACGACGTTA TTAAGGAGCG CGAACTTGAA GAGCTTCTCA ATAAAAAAAC CAGACATCGA
TACTCCGAGA AAACCAGAAA GGACGTAAAG CCTCACTCGC CGTTACTCTC AGAGGTTTAT
AAAGAATTCC TTCAGCACAA GATTAATAAA GAAAACCTTA CACTAAAAAT GCAAAAGGAT
TACGAACGCT ATTGGATCGT GTGGACTGCT ATAGGTCCTG ATAAAGCCAT AAATGATTAT
TTACCCAAAG ATATTGGGAT TTTCATTGAT AGGTGCTTTG AATTGCCAAA AATGAACAAG
TCCCCCTACA ACAAAATGGG CTGGGAAGAA CGGCTCAATT GCGACGTGAG TGAAGATGAT
TTAGTTACCC CTAAGACCGT CCAGCATTAT TATAAGTTAC TCCAAGGGGT GTTTGCTTAT
GCTAAAAAAG ACACTGTAGG ATACATAGCT AGCTCTCCAT GTAACATTAA GCGAGATTTT
AAGCAGAGGC GGCGGGGTAT CTATTTTGAT GAGGAGGTTA GGCGCTTTAT TACGTTTGCA
AACACTCAGA AGGTGGCATG GAAGAAGTGG TCGATCCTTT TAGGTATATA CACAGGTGCG
CGGCGCTCGG AGATTTTTCA GTTAAGAACA GAAGACATCA AGAAGGACTC TGATAGTGGT
AGATACTACC TGCTCATCAC GGATGAACAT GATACGCAAA AGCTAAAAAC CGAAAATGCC
AAACGTAGAA TCCCTCTACA CAATGACCTT ATTAACTATG GATTTTTAAC ATACGTTTCC
GAATGCGACG AACGTGTTCT TGAGGGTATT TCTAGTCCCG AAACTATTAC CCGCTGGTTC
GCTAGAGTAG TAGAGCAATT GAGTATAAAA ACTATAAATG AGGTAGGTGA TATGCGTTCT
TTTCATAGTT TCCGCCATAC CTTCATAACC AAAATTAGAA CAGAGGGTGA ATTTGATCTT
TCGCTTCTAC AACAAATTGT AGGGCATGGA ATTTCCAAAG CTGGGATTAC AGACAAATAT
ACTCATGGTG GTGCTTCAAT CGCTCGTTTA GGTAATGTAA TTGACACATT TAATTTGTGA
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| Protein sequence | MKTVKKLKYL SIRDKNYYFR FNFPRKLLRA DIRLSLNTQN LVYALQRIEL LKPFTDELKM
LATASKGLNL SSLQQRIIGV KENMRKKLTL HDIDTVIGES ERNVSNHIHM MDVLSDVTVK
ELSSETLKLL ADVMLTDDFE LMQRKVVSYA SMSDSFQRGL SLVAKFAVLR ATAGSELEGS
AINSANGQGL EDISRMIRYN DIPEVGSVDT TENLREKETE SLLRELGYEY QTGSIAFKVL
NKKLANSRYL KNNIALAIIN NDVIKERELE ELLNKKTRHR YSEKTRKDVK PHSPLLSEVY
KEFLQHKINK ENLTLKMQKD YERYWIVWTA IGPDKAINDY LPKDIGIFID RCFELPKMNK
SPYNKMGWEE RLNCDVSEDD LVTPKTVQHY YKLLQGVFAY AKKDTVGYIA SSPCNIKRDF
KQRRRGIYFD EEVRRFITFA NTQKVAWKKW SILLGIYTGA RRSEIFQLRT EDIKKDSDSG
RYYLLITDEH DTQKLKTENA KRRIPLHNDL INYGFLTYVS ECDERVLEGI SSPETITRWF
ARVVEQLSIK TINEVGDMRS FHSFRHTFIT KIRTEGEFDL SLLQQIVGHG ISKAGITDKY
THGGASIARL GNVIDTFNL
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