Gene Patl_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0716 
Symbol 
ID4172172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp809960 
End bp810709 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content46% 
IMG OID638053718 
Producthypothetical protein 
Protein accessionYP_660298 
Protein GI109897043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.716987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATA GCGGATTATT AACCACCGAT GGCCATGCAT TAATAGCGGC AAAAATAGCC 
GCTGACGCAA AGCTGAATAT CACCACATTT AAGTTTGCCA ACGTGAACGG GTTAGACCCA 
AACACCCTGC CTGAAAACTA CAGCCAAAGT GAACCCACCG CAGATTTGGT GCACACCATG 
GCTGTAACCC GTGCTGGTAG CATAAATAGT GACACTGTGG TGTATAGCGC CGTACTCGAT 
ACCACCATAG GTGATTTTAA TTTCAATTGG ATCGGCCTAT ACGACGAAAA CGACACCCTT 
GTATTTATTA AGTACACGGC CATGCAATAC AAAACGGGTG ATATCTTTGG GGGTGGCAAC 
AACTTAACCC GCAACTTTGC ATTGAAGTTT ACCGGCGCAG CAGAGGTAAC AAACATCACC 
ATACCCGCTG AAAGCTGGCA GTTTGATGTA AGCGAAAAGA TTTTTGAGCG CTTAGATTGG 
CAACCCATTT ATGTAGATAC CATGGCGATT GAGGGGTTTA GATACCGCTT AATGAACCCG 
GTCACGCTCA CAATACCTGA AGCGCAAAAC AAGAGTATTC ACATTGTGGG CGATGTAGAC 
AGCGGCATTA GTTTGGCGTC ACCGGCGACA GTACTTGTTC AAAACAATGG GCCAATACGC 
ACCACGCGGG GCGAGTACAG CGAATTTTTA TTAACCAAGA ACGAGTCAAC TTGGCGAATT 
GATTATGTGG ATGGGGTAGC AACATTATGA
 
Protein sequence
MSNSGLLTTD GHALIAAKIA ADAKLNITTF KFANVNGLDP NTLPENYSQS EPTADLVHTM 
AVTRAGSINS DTVVYSAVLD TTIGDFNFNW IGLYDENDTL VFIKYTAMQY KTGDIFGGGN 
NLTRNFALKF TGAAEVTNIT IPAESWQFDV SEKIFERLDW QPIYVDTMAI EGFRYRLMNP 
VTLTIPEAQN KSIHIVGDVD SGISLASPAT VLVQNNGPIR TTRGEYSEFL LTKNESTWRI 
DYVDGVATL