Gene Patl_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0703 
Symbol 
ID4173435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp800334 
End bp800783 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content45% 
IMG OID638053705 
Productprophage PSPPH06, putative tail tube protein 
Protein accessionYP_660285 
Protein GI109897030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATA TTTCAGGTAA AGATTTTGAC GTAATGATTG GCGACTTATT GGTACACATT 
GAATCGTTCA ATGCCACCAT TACCGACGAG CGCACCCCAG TAAAATCAGG CGGTGTGCCT
AATGGTTACG TTGACGGTGA CTGTGCCTGT TCCGGTGATT TAGAGCTAGA CAGCCGCAAC
TTTAACGTGC TGTCAGAAGC CGCCAAAAGT GCAGGTAGCT GGAAAGGCCT AGAGCCGTTC
GACATTAACG CCATAGCGTT AACAGACAGC GCAGAAATGG GCGTTGAAAT GTTCGGTTGT
ATGCTGAAAA TCAGTGATTT ATTAGCGATT GATCCCAACG GCAAAGAAAA GAAAAAACAC
AAAATTGGTT TTGACGTAAC AGACAAAGAG TTTGTCAGAA TCAACGGTGT GCCGTACCTC
ACGGTTGAAG AAATCGCGGA CATTATTTAA
 
Protein sequence
MKHISGKDFD VMIGDLLVHI ESFNATITDE RTPVKSGGVP NGYVDGDCAC SGDLELDSRN 
FNVLSEAAKS AGSWKGLEPF DINAIALTDS AEMGVEMFGC MLKISDLLAI DPNGKEKKKH
KIGFDVTDKE FVRINGVPYL TVEEIADII