Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0688 |
Symbol | |
ID | 4172663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 785528 |
End bp | 788209 |
Gene Length | 2682 bp |
Protein Length | 893 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053690 |
Product | bacteriophage replication gene A |
Protein accession | YP_660270 |
Protein GI | 109897015 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.754917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCACG TTCGCCAGCT GCCTAACCCG TTCATACCGG CCATGCACCA ACACTTGGTG CAGTGGCCTG TTCGCACGTC TGGTACAAAT GCCGACGGCA CCCGCTATTT TGCGCCTATT GATTTATCAG CCACCCAAGC TGAAAAAGCG CTGTGGAAAT TAGGCGACGA CGGCGACCGT TATCACCGCT CTAAAATACT GCGCGGTTTG CCGCAATCAG TGGGCAATGC AGTGGCCACG GTTTACAAAG ACATGTACCG CAGCGACAAC AGCAAAAAAG GCGAAGCCGT AAAACGCCAA CGGGCTAACC GCTATTTAAC TGGCATATAC AACCGCCACT TATCAAGCAA AATGGCTGTG CTGTGCCAAA ACCCGCTTAT TTTCAAACCA AGCGACATGA TCGTTGATGA CGAATACTTA AACATGACGT TCGGCATAGC CCCTGAACTA AAAAGCCTGA ATAAAAAGGC CCAAAGCGCA CACGAAAACT ACTTGTTAGA TTTGCTCGAA TACTGGCAAG AATCAGAGTT GATGCCCGTT AAGCGCACCA AAGAAGAAAG CGAACCCAGC GTGGTTTACC ACGAAGACGG CACCACCACG ATTAAAACCG CCAAGTCAGA CAACCACCAA GCCAGCAGCC ATGACCTGCA AAACTTTTGG AACCGCAGCG ACAACGAATT GCGCGACTAC GCATTCGACA TGGTGCGCAT GGTGTATCAA TTCTTACAAA GGCTGGTAAT AGCAGGGCGC GATCACTTCT CAGAAAACGA CCTGCTTAAA CGTATTTATC AAGTGGTGTG CGCCATACCA AACCAAATGT GCATACGCGA AAAATACCAA GACATATCAA TCGAAAAATT CACCACAGAA CATGCCGACA TTGGCCTAGC CCGTTTATTG TGTGAAAAAT GGTGGCTGCG TAAATTACGC AAAGTACACC GCCAAAAGCA CGAAGAAATC GCCATAGCCT GCGGCGTAGT GCACAGCGGC ACCCAGTGTT ATGTCAGCAA CGACACCTAC AAATACTTTG AAAGACGCCA ACAAGAAAGC CTAAAAGTGC TAGGTGATAT GGTTGCCTAC AACGAAGAAA GCGACCAAGA AGTGCCGCTT TTATCCCTGA TTGAAAAGTC AGTCTCTAAC CCTAAAATTC GTCGCCACGA ACTAATGACC CGCATGCGCG GCTGCGAAGA CTTCGCCATA GAACAGGATC ACGTCGGGCT ATTCATCACC CTAACCGCAC CCAGTAAATG CCACCCAACC AGTAGCCGAA AGTTAAAGGG TGAAAAGTCG ATTATCGCCA ACCCGAAATA TAACGGCGTT ACCCCAGACG AAACCAACCG CTACTTAAAC AACGTGTTCG CCCTTATTCG CTCAGCGCTA GACAAACTCA ATATCAAGCC TTACGGGTTC AGAGTCGTTG AGCCCCACGA AGACGAAACA CCGCACCAGC ACTACATGCT GTTCTGCACT GACAAACAAC AGAACACCAT AATTGATATG TTTTATCACT ACGGTTTGCA AATAGACGGC AACGAAGCGG GCGCCAAAAA ACACCGCGTG ACCGTGGAAA AAATGGACCC CAAAAAAGGC AGCGCCACCG GGTACATAGC CAAATACATT TCAAAGAATA TTGACGGTTA TCAAACCGAC GGCAAAGAAA TAGGCGAAGA CAACTACGGC AACCCAGCCG CCGAAGCAGC CAAGCGCATT ACCGCATGGC GCAAGTGCTG GGGCATTCGT GCCTTTCAAC CGTTTGGGCA ACCCTCAGTA GGCATTTGGC GAGAACTGCG CAAGTTCAAC AGCGAAGAAA CAGGCCAATG GCGCGAAAAG CTCAACACAG AAAAAGCAGG CACCTATAAC AGTCACGTTA TTGCCTGGTT AAATCACACG CGCCCGGCAA AAGCCTGCGC CAACGACGAA ATAGAAAAAT GCCGTTTCTG GGCAGACACA GGCAAGTGGG ACAAATTCAT ACAAGAAATG GGCGGGGTCA ACACAAAGCG CGATAACCGC CCCGTATGGT TGCTAAAACC AAACGAGCCC GTGATTAACC GCTACAACGA AGCCGTGCCG CACAAAGCCA TTGGTGTAGA AAGCATCACC GGCAGCATTA TTACCAGTGA TAAAACATGG ACCCTACACC GCAAAGGCGA AAGCCCTAAA CGTATCGCCC TTGACGCTTT AAAAGCAGCG CGCAGCGGTG CGTCGTCTTT TGATTCTGCT CTTAGCGAAG CGGGAACCGC GCAGCCTTGG AGTGCTGTCA ATAACTGTAC CGACAGCACC TTAGAGCAGC CCAATAAACC CGAAGAACCC GCTTTTACCC CCATGTTTGC CTATCCAAAA CCACCGGTTT TTGAACAAGC ACAAGAATAC CTAAGCGAAA TAAGCGAAGA AGACCAAGAA CTAGCCGAGT TTTTACTTAA TAGAACACCC GCCCCATTAA TCAAGGGGCA AATTCAAAGA CTTAAGAAGG GCACTAACCT GCGTTTGAGC GCCAATAAAG CCTTAAAAAT AGTCGAATAC GAAAACGGCG AGAAACACCT TACCCAAACC CACGTAACCG ACCCGAACGA CGATTGGTTT ATAGAAGAAG AAGAACCCTT CGACCCCAAC AAACCGATTT TTACCGCCGA ATCAGGCCTA AAAATCATCA ACGGTAAACT GCACATAGGA ACGGCCGCAT GA
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Protein sequence | MHHVRQLPNP FIPAMHQHLV QWPVRTSGTN ADGTRYFAPI DLSATQAEKA LWKLGDDGDR YHRSKILRGL PQSVGNAVAT VYKDMYRSDN SKKGEAVKRQ RANRYLTGIY NRHLSSKMAV LCQNPLIFKP SDMIVDDEYL NMTFGIAPEL KSLNKKAQSA HENYLLDLLE YWQESELMPV KRTKEESEPS VVYHEDGTTT IKTAKSDNHQ ASSHDLQNFW NRSDNELRDY AFDMVRMVYQ FLQRLVIAGR DHFSENDLLK RIYQVVCAIP NQMCIREKYQ DISIEKFTTE HADIGLARLL CEKWWLRKLR KVHRQKHEEI AIACGVVHSG TQCYVSNDTY KYFERRQQES LKVLGDMVAY NEESDQEVPL LSLIEKSVSN PKIRRHELMT RMRGCEDFAI EQDHVGLFIT LTAPSKCHPT SSRKLKGEKS IIANPKYNGV TPDETNRYLN NVFALIRSAL DKLNIKPYGF RVVEPHEDET PHQHYMLFCT DKQQNTIIDM FYHYGLQIDG NEAGAKKHRV TVEKMDPKKG SATGYIAKYI SKNIDGYQTD GKEIGEDNYG NPAAEAAKRI TAWRKCWGIR AFQPFGQPSV GIWRELRKFN SEETGQWREK LNTEKAGTYN SHVIAWLNHT RPAKACANDE IEKCRFWADT GKWDKFIQEM GGVNTKRDNR PVWLLKPNEP VINRYNEAVP HKAIGVESIT GSIITSDKTW TLHRKGESPK RIALDALKAA RSGASSFDSA LSEAGTAQPW SAVNNCTDST LEQPNKPEEP AFTPMFAYPK PPVFEQAQEY LSEISEEDQE LAEFLLNRTP APLIKGQIQR LKKGTNLRLS ANKALKIVEY ENGEKHLTQT HVTDPNDDWF IEEEEPFDPN KPIFTAESGL KIINGKLHIG TAA
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