Gene Patl_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0679 
Symbol 
ID4172654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp781046 
End bp781546 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content49% 
IMG OID638053681 
Producthypothetical protein 
Protein accessionYP_660261 
Protein GI109897006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCA AAGTCTCATT AAAGAAAAGC AAACTTGCAT GTACTGACCC AATCGGGGTG 
GGCTATACCT TCCTGCTTGA ATACAAAGAC GCTATCTGTG CGCAGGTCAT GCATTGTTCA
CCAGGTGTGG CACGCAACAA ACTAAACCCA GATTGCGAAA CCAATCACCA AACCCTTGAA
AACGCCGTTG CACTATCACA AGAGCTTGAC GACGACCGCC AGTTAGAAGC ATGGGCAGCA
CTGCGTGGCA AAGCCATGTT TGATTTACCC CAAGGCAGCG TGTCAGACGA CGAGTTAACC
GACCAAATTC TATTGGTGGC TGAAAACTTC GGCAACATCA GCGAAGAATT ACGCCAAGCC
CGCAAAGACG GCATCATCGA CCCAGAAGAA CGCAACGCCA TACAGCGCCG CGTTATGGCA
ATGGTCAGCA GCCTAATGAA CCTTGACGCC GAAGTAGCAA GCCAAGTGCG CCAATTCCCC
ACCAAAATAA AATCAGCTTA A
 
Protein sequence
MKSKVSLKKS KLACTDPIGV GYTFLLEYKD AICAQVMHCS PGVARNKLNP DCETNHQTLE 
NAVALSQELD DDRQLEAWAA LRGKAMFDLP QGSVSDDELT DQILLVAENF GNISEELRQA
RKDGIIDPEE RNAIQRRVMA MVSSLMNLDA EVASQVRQFP TKIKSA