| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0670 |
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| Symbol | |
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| ID | 4173325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 772663 |
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| End bp | 773244 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053673 |
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| Product | fimbrial assembly |
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| Protein accession | YP_660253 |
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| Protein GI | 109896998 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCACATA TAAACTTGCT GCCTTGGCGC GAAGCCCAGC GTCAACAACA CAAGAAAAAC
TACCTAACCA TGTTAGTGGC TATCGGCGTG TCTATGGTGT TGTTGATGTT TGCAGTCAGT
AAAACCATGG ATAATCTTAT TGCCACTCAA GAAAATCGGA ATCAGTTTTT AACCGCAGAG
CTAGTCAAAA TCGACGCGCA AATTGGTGAA ATTAAACGCA TAAGACAAAG TAAAGACGCT
ATCGAGCAGC GTATGACACT TATCGAACAA CTAGAAGTAA GTCGCAATGC AGCGCCTATT
GTGCTCGATG AGTTGGCTCG TGTGGTGCCC CCGGGGGTAT CTTTTGCGCG CTTTTCTCGC
ACTATCAACC GCGTAGAAAT CAACGGCGTC AGTGATTCAA ACAATCGTCT GGCGAATTTC
ATGCGTAATG TGTCTGACTC AACAGTGTTC AATGACGGTG AGTTGTCTTC CATTGTGGCT
GATACCACAG CAGCTGATGC CGTAAGCGAA TTTAAACTCA AGTTTAACAT TAGCCCCAAT
ATCGCCCCTG ATTTTAATCA ACCACAAGGG GAAGCAAAAT AA
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| Protein sequence | MPHINLLPWR EAQRQQHKKN YLTMLVAIGV SMVLLMFAVS KTMDNLIATQ ENRNQFLTAE
LVKIDAQIGE IKRIRQSKDA IEQRMTLIEQ LEVSRNAAPI VLDELARVVP PGVSFARFSR
TINRVEINGV SDSNNRLANF MRNVSDSTVF NDGELSSIVA DTTAADAVSE FKLKFNISPN
IAPDFNQPQG EAK
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