| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0668 |
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| Symbol | |
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| ID | 4173323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 771521 |
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| End bp | 772054 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053671 |
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| Product | pilus assembly protein, PilQ |
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| Protein accession | YP_660251 |
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| Protein GI | 109896996 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.56514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCGT TGATAGCGAT TACAATGCTC TTCATACTGG CAGCCTGTTC AGAACAAAAA
CAAGATTTAA ACGCCTATAT CGCGGATGTT AAAAGCAACA CACCGGTGAA TATTGAGCCC
TACCCTGAAT TTACCACATC ACCAGCCTTT GCCTATTCGG CAAATGAAAT GCGTAGTCCA
TTCCAGCGAT TGAAAAATGT ACCGCAAGCT GAAACGGCAG CAGCAACAAC CAGTTGCCCT
CAACCGAGTA CGGCACACGT TAAACAACCC CTAGAGCACT ACGGAATAGA TGCTATGGCG
TTTATTGGCA CCATCAATAA AAACAATAAG GTCTGGGCCT TAATTCAAAC CAACGAAGGC
CGATTATACC GTGTGACCAA AGGTGATTAT CTTGGACTTT TTTATGGCAA GGTCTCAGCA
ATTAAAGATG GAAAAATCAC CTACACTGAA ATGTTGCCTG ATGGAACAGG TTGCTGGCAG
CAAAAACAAG CAACCTTGTC GATGAAAGAC AATGCAGGAG AGAACAATGG CTAG
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| Protein sequence | MRALIAITML FILAACSEQK QDLNAYIADV KSNTPVNIEP YPEFTTSPAF AYSANEMRSP
FQRLKNVPQA ETAAATTSCP QPSTAHVKQP LEHYGIDAMA FIGTINKNNK VWALIQTNEG
RLYRVTKGDY LGLFYGKVSA IKDGKITYTE MLPDGTGCWQ QKQATLSMKD NAGENNG
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