| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0666 |
|---|
| Symbol | aroK |
|---|
| ID | 4173321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 769036 |
|---|
| End bp | 769551 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638053669 |
|---|
| Product | shikimate kinase I |
|---|
| Protein accession | YP_660249 |
|---|
| Protein GI | 109896994 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000317623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA AACGTAATAT TTTTTTAATA GGTCCGATGG GTGCTGGTAA AAGCACGATT
GGAAGACACC TCGCAGACGA ACTTCATTTA GAATTTTATG ATTCAGATCA AGAGATAGAA
AAGCGCACTG GTGCTGATAT CGCTTGGATC TTTGATTTAG AGGGTGAAGA AGGCTTTCGC
GCTCGTGAAG AAACCGTCAT CAATGATTTA ACCGACAAAC AAGGTATTGT TTTGGCAACT
GGCGGTGGCT CTGTCGTCAG TAAAGCTGTG CGTAATCGCC TATCAGCGAG AGGCATTGTG
GTTTACTTAC AAACCACAAT TGACAAGCAA GTCGCTCGTA CGCAACGTGA TAAACGTCGT
CCATTACTGC AAAAGGACGA TCCAGAAACC GTATTGCGTA GACTCGCCGA AGAACGCAAC
CCAATGTATG AAGATGCTGC TGATTACATT GTTGATACTG ATGAGCAAAG CGCCCGCGCG
GTAGCCAATC AGATCATTGA GAAAATCAAT CAGTAA
|
|---|
| Protein sequence | MAEKRNIFLI GPMGAGKSTI GRHLADELHL EFYDSDQEIE KRTGADIAWI FDLEGEEGFR
AREETVINDL TDKQGIVLAT GGGSVVSKAV RNRLSARGIV VYLQTTIDKQ VARTQRDKRR
PLLQKDDPET VLRRLAEERN PMYEDAADYI VDTDEQSARA VANQIIEKIN Q
|
|---|
| |