| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0658 |
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| Symbol | |
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| ID | 4173313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 761791 |
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| End bp | 762804 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053661 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_660241 |
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| Protein GI | 109896986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC CAATTGTATT AAGCGGCTGC CAGCCTTCAG GACAACTTAC CCTAGGAAAT
TATGTTGGCG CTCTTCGTCA ATGGGTTGAT ATGCAAGACG ATAACGAATG TCTGTATATG
TTAGTCGACA TGCATGCTAT CACAGTGCGA CAAGATCCCG CTGCACTGCA CAATGCCTGT
CTCGATGGGC TGGCCTTGTA TGTGGCTTGT GGCATCGACC CGAGCAAGAG CACCATATTC
ATGCAATCAC ATGTACCACA GCATGCGCAA CTAGCTTGGA TAATGAACTG CTACACCCAG
ATGGGTGAAT TAAACCGCAT GACGCAGTTT AAAGATAAAT CCGCTAAGAA TATTACTAAC
ATTAATTCAG GTCTTTACAC TTACCCAGCC TTAATGGCGG CGGATATCTT GCTATATCAA
GCGAAACAAG TCCCAGTAGG GGAAGATCAG AAGCAGCATT TAGAACTAAC CCGTGACGTT
GCCACACGCT TTAACAATGC CTATGGTGAT GTATTTACTA TTCCTGATCC GTATATCCCT
GAAGTAGGCG CGCGTATCAT GAGCCTACAA GATCCGCTGA AAAAGATGTC TAAATCCGAT
GATAATCAAA ATAACTTCGT TGGCTTATTG GAAGATCCGA AAAAGATAAG TAAAAAGATT
AAACGCGCAG TCACTGACTC GGATGAGCAA GCGCGCATTT ACTTTAATAC CAGCGAAAAA
CCTGGTGTGT CGAATTTACT CAGCTTGCTA TCTTGTGCAA CCGGCAAACC GATTGCTGAT
TTAGTGCCTG AATATGAAGA TAAGATGTAC GGCCATTTAA AAACAGATGT AGCCGATTCC
ATCGTTGCCA TGCTAGAGCC AATCCAAGCT AAATTTACTG AGTTACGTCA GGATCAAACC
GAGCTGAACC GTATCATGGC GGCAGGCGCT GAAAAAGCGC AAGTACGAGC CCAGCAAACC
ATAGACAAGG TTTATGAAGC AATCGGATTC GTAGCAAGCC CACTTAAACG CTAG
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| Protein sequence | MSKPIVLSGC QPSGQLTLGN YVGALRQWVD MQDDNECLYM LVDMHAITVR QDPAALHNAC
LDGLALYVAC GIDPSKSTIF MQSHVPQHAQ LAWIMNCYTQ MGELNRMTQF KDKSAKNITN
INSGLYTYPA LMAADILLYQ AKQVPVGEDQ KQHLELTRDV ATRFNNAYGD VFTIPDPYIP
EVGARIMSLQ DPLKKMSKSD DNQNNFVGLL EDPKKISKKI KRAVTDSDEQ ARIYFNTSEK
PGVSNLLSLL SCATGKPIAD LVPEYEDKMY GHLKTDVADS IVAMLEPIQA KFTELRQDQT
ELNRIMAAGA EKAQVRAQQT IDKVYEAIGF VASPLKR
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