| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0657 |
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| Symbol | |
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| ID | 4173312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 760422 |
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| End bp | 761435 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053660 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_660240 |
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| Protein GI | 109896985 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCACA AACATCATTC TATTTCAGTT CATTTCGCTC AAGCTATTGT CAGAAGAGCC
ATTGATGTGG GCCTGAATGA AACGCAGTTA TTATCCGAGT CAGGCTTGAG TAAAGCCTTG
TTGAGCAATA ATGAGGTGCG TATCACCCCA GAGCAATTGA GCCGTTTGAT GCAATCTGTT
TGGCGAAGTG CAGATGATGA ATATTTGTGT TTTGGTAGCC AGCCTTCTCG CCATGGGGTG
TTCAATTTAA TGGCAAAGCA AGTGAGCCAT AGTGCAAGTT TGCGGCAGGT GTATCGACGG
GGCACTCGTT TTTATAATTT AGTCGCGGGC GCAACTAAAC TAAAATTTGA AGAGCGTGAA
AAGTACGCTC GTTTTTATCT CGCCTTAGAC AAACCTGAAC TCGACCCTGA GCATGTGCTT
ACCGACTTTC TCTTATTGTT GTGGCATCGA TTTCCGAGCT GGCTGATTGG CCAGCGCATT
CCCCTGCGTA AAATTGGTTT TATGCATGCA AAGCCTGCAC ATCACGAAGA ATATCGCTTG
ATGTTCCCTT GTGAGGTGGT TTACCTGCAA GAGAGTAATT ACTTTGAGTT TGAGCATGAC
ATCCTTAGCG CGCCAGTGGT GCAAAGTCAG CAAAGCTTGA ATGATTACCT TCAGCGCTGC
CCGCTGGATT GGTTTAAACG TCAGTCTTAC TTTCCGGTTT ATACCCGCAA AGTATTAAAT
TATCTAGAAG CGGCTGAGGA TATGTCAATT ATCAGCATGG CAGATATCGC TGAGCAATTG
CACACAACCA TTCGCACCTT ACGCCGTAAG CTATTAGAAG AAGGCACAAG TTTTCAAGAA
CTCAAAGACA GTGTGCGACG AGACGAAGCG ATCCATTATC TTAGCCAGCC TGATATGCCT
ATATCGCAAG TCGGGCGCTT ACTTGGCTTT ACCGAGGCGG CAACCTTTGC GCGTGCGTTC
AAAAGCTGGA CGGGTGTCGC CCCCAGTGCT TATCGAAAAT CAAAAGTACA TTGA
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| Protein sequence | MRHKHHSISV HFAQAIVRRA IDVGLNETQL LSESGLSKAL LSNNEVRITP EQLSRLMQSV
WRSADDEYLC FGSQPSRHGV FNLMAKQVSH SASLRQVYRR GTRFYNLVAG ATKLKFEERE
KYARFYLALD KPELDPEHVL TDFLLLLWHR FPSWLIGQRI PLRKIGFMHA KPAHHEEYRL
MFPCEVVYLQ ESNYFEFEHD ILSAPVVQSQ QSLNDYLQRC PLDWFKRQSY FPVYTRKVLN
YLEAAEDMSI ISMADIAEQL HTTIRTLRRK LLEEGTSFQE LKDSVRRDEA IHYLSQPDMP
ISQVGRLLGF TEAATFARAF KSWTGVAPSA YRKSKVH
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