| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0651 |
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| Symbol | argD |
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| ID | 4173005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 752962 |
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| End bp | 754167 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053654 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_660234 |
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| Protein GI | 109896979 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.293343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTGA CCCGCGAATT ATTTAACGAA GTAATGGTAC CTAACTATAA CCCAGCCGAC
ATTATTCCGG TGCGCGGTTT GGGCGCGCGC GTATGGGATC AAGAAGGTAA CGAATATATC
GATTTCGCTG GTGGCATCGC AGTAAACGTT TTAGGCCATT GTCATCCAGA ATTGGTCAAC
GTACTAAAAG AGCAAGGTGA AAAGCTTTGG CACTTAAGCA ACGTGTTGAC CAATGAGCCT
GTTTTACGCC TAGCGAAAAA GCTAACTGAC GCAACGTTCG CTGAAAAAGT CTATTTCGCC
AATTCAGGCG CCGAAGCCAA TGAAGCGGCT CTGAAACTTG CACGCCGCTT TGCGCTGGAT
AACTTTGGTC CTGAAAAAGA CCAAATCATC TCTTTCAAAC AAGGTTTTCA TGGTCGTACA
TTCTTCACTG TGACTGTCGG CGGCCAAGCG GCTTATTCTG ATGGTTTCGG GCCTAAGCCT
GGTGCAATTG ATCACGTTGA CTATAACGAT TTAAGCGCTC TTGAAGCCGT TATGTCTGAG
CGCACCTGCG CCGTAATGAT GGAGCCCTTA CAAGGCGAAG GCGGTATCAT CAGCCCAACA
CAGTCTTTCG TGCAAGGGGT TCGTGATTTA TGTGACAAGC ACAACGCACT TCTAATCTTT
GATGAAGTGC AATCAGGTGT TGGTCGTACC GGCGAGCTAT ACGCTTACAT GGGCTTAGGC
GTCACGCCAG ACATACTCAC CTCAGCAAAA GCACTTGGCG GTGGTTTTCC GATCGGGGCC
ATGCTTACCA CTACCGCTAT TGCCGCCCAT TTAAAAGTGG GTACTCACGG TAGCACGTAT
GGCGGGAACC CTCTTGCCTG CGCCGTAGCT GAAAAAGTAC TGGATATTGT CAATACCCCT
GAAGTATTAA ACGGTGTGAA GCAAAAAGAA CAACAGTTCC GCGAAGGCCT AAAGGCTATT
AACGATAAGT ATCATGTTTT CGATGAAGTG CGTGGACAAG GCCTATTGCT AGGCTGCGCT
CTAAACGAGA AATACCAAGG TCGCGCACGA GACTTCCTTG TTGCCAGTGC AAAAGAGAAG
CTAATGTGTT TAGTCGCCGG CGCTAACGTG GTGCGTTTCG CGCCGTCATT GATCCTGACC
GATGCCGATA TTCAGGAAGG TTTAGCCCGT TTCGAGCGCG CAGTTGCCGC TGTCGTAAAC
GCCTAA
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| Protein sequence | MQVTRELFNE VMVPNYNPAD IIPVRGLGAR VWDQEGNEYI DFAGGIAVNV LGHCHPELVN
VLKEQGEKLW HLSNVLTNEP VLRLAKKLTD ATFAEKVYFA NSGAEANEAA LKLARRFALD
NFGPEKDQII SFKQGFHGRT FFTVTVGGQA AYSDGFGPKP GAIDHVDYND LSALEAVMSE
RTCAVMMEPL QGEGGIISPT QSFVQGVRDL CDKHNALLIF DEVQSGVGRT GELYAYMGLG
VTPDILTSAK ALGGGFPIGA MLTTTAIAAH LKVGTHGSTY GGNPLACAVA EKVLDIVNTP
EVLNGVKQKE QQFREGLKAI NDKYHVFDEV RGQGLLLGCA LNEKYQGRAR DFLVASAKEK
LMCLVAGANV VRFAPSLILT DADIQEGLAR FERAVAAVVN A
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